HHsearch alignment for GI: 254780937 and conserved domain: PRK02950

>PRK02950 DNA-directed RNA polymerase subunit omega; Provisional.
Probab=99.70  E-value=5.7e-18  Score=121.53  Aligned_cols=62  Identities=31%  Similarity=0.586  Sum_probs=54.2

Q ss_pred             EEEHHHHHCCCCCHHHHHHHHHHHHHHHHC-----------CCCCCCCCCC-CCCHHHHHHHHHCCCCCHHHHH
Q ss_conf             000899851287899999999999999857-----------8877677446-8541156756540587999999
Q gi|254780937|r    3 RTTVEDCIDKVDNRFLLVLLASHRTRHLSQ-----------GAKPTVDVGK-DKNTVVALREIASGTLSPDDLE   64 (122)
Q Consensus         3 RvTvEdcl~kv~nrf~LVllAa~RArql~~-----------G~~~~v~~~n-dK~~ViALREIa~gki~~~~l~   64 (122)
T Consensus        14 ~P~id~Ll~kvdsky~LVi~aakRARqin~Y~~qL~eGl~e~vgPlV~~~~~~KPLsIAlrEI~eg~l~~e~~e   87 (89)
T PRK02950         14 NPPIDELLDRVDSKYALVIYAAKRARQINDYYNQLGEGLLEYVGPLVEPGLQEKPLSIALREINADLLTAEHTE   87 (89)
T ss_pred             CCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCCCC
T ss_conf             88899999854871100468788898888888886011003478855677788861113999876886441356