HHsearch alignment for GI: 254780937 and conserved domain: PRK03853

>PRK03853 DNA-directed RNA polymerase subunit omega; Provisional.
Probab=99.46  E-value=3.5e-14  Score=100.23  Aligned_cols=59  Identities=41%  Similarity=0.625  Sum_probs=52.4

Q ss_pred             HHHHCCCCC-HHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHHHCCCCCHHHHHH
Q ss_conf             998512878-99999999999999857887767744--685411567565405879999999
Q gi|254780937|r    7 EDCIDKVDN-RFLLVLLASHRTRHLSQGAKPTVDVG--KDKNTVVALREIASGTLSPDDLEE   65 (122)
Q Consensus         7 Edcl~kv~n-rf~LVllAa~RArql~~G~~~~v~~~--ndK~~ViALREIa~gki~~~~l~e   65 (122)
T Consensus        10 aKALe~v~~DRY~Ls~~vakRa~qLanGA~PLv~~d~~k~K~tdIAL~EIAeGKI~le~i~e   71 (73)
T PRK03853         10 AKALKNVGNDRYKLSLLVFKRAEQLANGAKPLVDMDPKKHKLADIALREIAEGKIDLERIVE   71 (73)
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf             99998728608999999999999986688642246845554899999999817520134201