HHsearch alignment of GI: 254780939 and MMDB domain: 1b12_A_1-71_216-248
>1b12_A (A:1-71,A:216-248) Signal peptidase I; serine proteinase, serine-dependant hydrolase, signal peptide processing, protein translocation, membrane bound proteinase; HET: 1PN; 1.95A {Escherichia coli}
Probab=99.83 E-value=1.3e-20 Score=149.16 Aligned_cols=103 Identities=45% Similarity=0.883 Sum_probs=85.9
Q ss_pred HHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEE
Q ss_conf 87516898998786677643369889998400587664122115422221125553347046640144200310000003
Q gi|254780939|r 30 IRTFLFQPSVIPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIG 109 (248)
Q Consensus 30 ir~fv~~~f~Ips~SM~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIG 109 (248)
+++|++|+|.|||+|||+||+.||+|+|+|++||.|.|..|.+.++.. .++.+++++..+...++..|+|
T Consensus 1 v~~~~~q~~~ipsssleksll~gd~l~vsk~~yg~~~PmTpltlPltg------Hkti~~~~~~SY~r~PqL~YvK---- 70 (104)
T 1b12_A 1 VRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETG------HPKRGDIVVFKYPEDPKLDYIK---- 70 (104)
T ss_dssp -CBCCEEEEECCSCTTTTTSCTTEEEEEEESEEEEECGGGSCEEEEEC------CCCTTCEEEEECTTCTTSEEEE----
T ss_pred CEEEEEEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCCCEEECCC------CCCCCCEEEEECCCCCCCCEEE----
T ss_conf 929999959917602611340699899993746866776585540145------5534635665024688642100----
Q ss_pred ECHHHEEECCCCEEECCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEECCCCEEEEE
Q ss_conf 04234320077324535312245446400221478620122102214678500022124557887453023244649997
Q gi|254780939|r 110 LPGDRISLEKGIIYINGAPVVRHMEGYFSYHYKEDWSSNVPIFQEKLSNGVLYNVLSQDFLAPSSNISEFLVPKGHYFMM 189 (248)
Q Consensus 110 lPGDtV~i~~~~l~INg~~i~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~VP~g~yfvl 189 (248)
T Consensus 71 -------------------------------------------------------------------------------- 70 (104)
T 1b12_A 71 -------------------------------------------------------------------------------- 70 (104)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred ECCCCCCCCCCCCCCCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCC
Q ss_conf 1788777644536530260888253389999743788775435554567013342232
Q gi|254780939|r 190 GDNRDKSKDSRWVEVGFVPEENLVGRASFVLFSIGGDTPFSKVWLWIPNMRWDRLFKI 247 (248)
Q Consensus 190 GDNRdnS~DSR~~~~G~Vp~~~IvGka~~i~~S~d~~~~~~~~~~~~~~iRw~R~f~~ 247 (248)
.|++|||.+||+|++.+.. +|+.++|.+|+++.
T Consensus 71 --------------------R~~~g~~~~iw~~~~~~~~-----~wp~g~~~~rig~i 103 (104)
T 1b12_A 71 --------------------RNLVGRATAIWMSFDKQEG-----EWPTGLRLSRIGGI 103 (104)
T ss_dssp --------------------EGEEEEEEEEEEEBC-------------CBCGGGCBCC
T ss_pred --------------------CHEEEEEEEEEEECCCCCC-----CCCCCCCCCCCCCC
T ss_conf --------------------2948888999997888767-----57677631136037