HHsearch alignment of GI: 254780939 and MMDB domain: 2fjr_A_71-189
>2fjr_A (A:71-189) Repressor protein CI; genetic switch, regulation, cooperativity, transcription regulator; 1.95A {Enterobacteria phage 186} PDB: 2fkd_A
Probab=97.74 E-value=1.5e-05 Score=54.36 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=45.8
Q ss_pred EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEECHHHEEE
Q ss_conf 99878667764336988999840058766412211542222112555334704664014420031000000304234320
Q gi|254780939|r 38 SVIPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIGLPGDRISL 117 (248)
Q Consensus 38 f~Ips~SM~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIGlPGDtV~i 117 (248)
++|.+.||+|++..||.++|++- .+++-|++|+-. .+..++||+.-.||+++.+
T Consensus 38 l~v~GdSM~p~i~~Gd~viVd~~----------------------~~~~~g~~vi~~----~~~~~ikr~~~~~~~~i~l 91 (119)
T 2fjr_A 38 FTKPLTDGMAIRSEGKIYFVDKQ----------------------ASLSDGLWLVDI----KGAISIRELTKLPGRKLHV 91 (119)
T ss_dssp CSSCCSSEEEEEETTEEEEEETT----------------------CCSCSEEEEEEE----TTEEEEEEEEEETTTEEEE
T ss_pred EECCCCCCCCEECCCCEEEECCC----------------------CCCCCCEEEEEC----CCEEEEEEEEECCCCEEEE
T ss_conf 77268887427479999999399----------------------722585799981----6817999999848986999
Q ss_pred C
Q ss_conf 0
Q gi|254780939|r 118 E 118 (248)
Q Consensus 118 ~ 118 (248)
.
T Consensus 92 ~ 92 (119)
T 2fjr_A 92 A 92 (119)
T ss_dssp E
T ss_pred E
T ss_conf 6