HHsearch alignment of GI: 254780939 and MMDB domain: 3bdn_A_100-236

>3bdn_A (A:100-236) Lambda repressor; repressor, allostery; HET: DNA; 3.91A {Enterobacteria phage lambda}
Probab=96.63  E-value=0.0038  Score=39.19  Aligned_cols=50  Identities=22%  Similarity=0.218  Sum_probs=37.4

Q ss_pred             EEEEECCCCC------CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEE
Q ss_conf             9899878667------7643369889998400587664122115422221125553347046640144200310000003
Q gi|254780939|r   36 QPSVIPSGSM------IPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIG  109 (248)
Q Consensus        36 ~~f~Ips~SM------~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIG  109 (248)
                      ..++|.++||      ||++..||.|+|+.                      ..++..||+++....  .+..++||+.-
T Consensus        42 ~a~~v~GdSM~~~~~~eP~i~~Gd~vivd~----------------------~~~~~~g~~~vv~~~--~~~~~iKr~~~   97 (137)
T 3bdn_A           42 FWLEVEGNSMTAPTGSKPSFPDGMLILVDP----------------------EQAVEPGDFCIARLG--GDEFTFKKLIR   97 (137)
T ss_dssp             EEEECCSSSSCCCSSCSSCCCSSCEEEECC----------------------SSCCCTTSEEEEEST--TTCCCCEEEEC
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCEEEEECC----------------------CCCCCCCEEEEEEEE--CCCEEEEEEEE
T ss_conf             899981562256767898556763688515----------------------677763509999990--79379999999