HHsearch results for GI: 254780939 and protein with PDBid: 2fjr_A

>2fjr_A Repressor protein CI; genetic switch, regulation, cooperativity, transcription regulator; 1.95A {Enterobacteria phage 186} PDB: 2fkd_A
Probab=95.18  E-value=0.015  Score=34.47  Aligned_cols=52  Identities=15%  Similarity=0.236  Sum_probs=32.5

Q ss_pred             ECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEECHHHEEE
Q ss_conf             878667764336988999840058766412211542222112555334704664014420031000000304234320
Q gi|254780939|r   40 IPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIGLPGDRISL  117 (248)
Q Consensus        40 Ips~SM~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIGlPGDtV~i  117 (248)
                      +...||+|++..||.++|++-                      ....-| +.++..   .+..+|||+.-+||-.+.+
T Consensus       110 ~~g~sm~p~~~~Gd~v~vd~~----------------------~~~~dG-iyvi~~---~g~~~iKrl~~~p~g~i~~  161 (189)
T 2fjr_A          110 KPLTDGMAIRSEGKIYFVDKQ----------------------ASLSDG-LWLVDI---KGAISIRELTKLPGRKLHV  161 (189)
T ss_dssp             SCCSSEEEEEETTEEEEEETT----------------------CCSCSE-EEEEEE---TTEEEEEEEEEETTTEEEE
T ss_pred             ECCCCCCCEECCCCEEEEECC----------------------CCCCCC-EEEEEE---CCCEEEEEEEECCCCEEEE
T ss_conf             179877768579949999299----------------------844498-899981---7928899999858986999