HHsearch results for GI: 254780939 and protein with PDBid: 2fjr_A
>2fjr_A Repressor protein CI; genetic switch, regulation, cooperativity, transcription regulator; 1.95A {Enterobacteria phage 186} PDB: 2fkd_A
Probab=95.18 E-value=0.015 Score=34.47 Aligned_cols=52 Identities=15% Similarity=0.236 Sum_probs=32.5
Q ss_pred ECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEECHHHEEE
Q ss_conf 878667764336988999840058766412211542222112555334704664014420031000000304234320
Q gi|254780939|r 40 IPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIGLPGDRISL 117 (248)
Q Consensus 40 Ips~SM~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIGlPGDtV~i 117 (248)
+...||+|++..||.++|++- ....-| +.++.. .+..+|||+.-+||-.+.+
T Consensus 110 ~~g~sm~p~~~~Gd~v~vd~~----------------------~~~~dG-iyvi~~---~g~~~iKrl~~~p~g~i~~ 161 (189)
T 2fjr_A 110 KPLTDGMAIRSEGKIYFVDKQ----------------------ASLSDG-LWLVDI---KGAISIRELTKLPGRKLHV 161 (189)
T ss_dssp SCCSSEEEEEETTEEEEEETT----------------------CCSCSE-EEEEEE---TTEEEEEEEEEETTTEEEE
T ss_pred ECCCCCCCEECCCCEEEEECC----------------------CCCCCC-EEEEEE---CCCEEEEEEEECCCCEEEE
T ss_conf 179877768579949999299----------------------844498-899981---7928899999858986999