HHSEARCH alignment of GI: 254780939 and SCOP domain: d1f39a_

Alignment

Probab=97.21  E-value=0.00034  Score=43.37  Aligned_cols=48  Identities=23%  Similarity=0.250  Sum_probs=36.8

Q ss_pred             EEECCCCC------CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEE
Q ss_conf             99878667------7643369889998400587664122115422221125553347046640144200310000003
Q gi|254780939|r   38 SVIPSGSM------IPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIG  109 (248)
Q Consensus        38 f~Ips~SM------~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIG  109 (248)
                      .+|.++||      ||++..||.|+|++-                      .+|+.||+|++....  ...++||+.=
T Consensus         8 l~V~GdSM~~~~~~ep~i~~Gd~viVd~~----------------------~~~~~g~ivva~~~~--~~~~vKr~~~   61 (101)
T d1f39a_           8 LEVEGNSMTAPTGSKPSFPDGMLILVDPE----------------------QAVEPGDFCIARLGG--DEFTFKKLIR   61 (101)
T ss_dssp             EECCSSTTCCCTTCSSCCCTTCEEEEETT----------------------SCCCTTCEEEEECTT--SCEEEEEEEE
T ss_pred             EEEECCCCCCCCCCCCCCCCCCEEEEEEC----------------------CCCCCCCEEEEEECC--CEEEEEEEEE
T ss_conf             99958754788666898498999999814----------------------755779899999889--8089999997

SCOP domain information

class: All beta proteins
fold: LexA/Signal peptidase
superfamily: LexA/Signal peptidase
family: LexA-related
domain: lambda repressor C-terminal domain
species: Bacteriophage lambda [TaxId: 10710]