PSIBLAST alignment of GI: 254780939 and protein with PDB id: 1b12
>gi|6730070|pdb|1B12|A Chain A, Crystal Structure Of Type 1 Signal Peptidase From Escherichia Coli In Complex With A Beta-Lactam Inhibitor Length = 248
>gi|6730071|pdb|1B12|B Chain B, Crystal Structure Of Type 1 Signal Peptidase From Escherichia Coli In Complex With A Beta-Lactam Inhibitor Length = 248
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 55/258 (21%)
Query: 30 IRTFLFQPSVIPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGD 89
+R+F+++P IPSGSM+PTLL+GD+I+V KF+YG + + I P+RGD
Sbjct: 1 VRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTL------IETGHPKRGD 54
Query: 90 VVVFRYPKDPSIDYVKRVIGLPGDRISLEKGIIYINGAPVVRHME--------------- 134
+VVF+YP+DP +DY+KR +GLPGD+++ + + P +
Sbjct: 55 IVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEP 114
Query: 135 -----------------GYFSYHYKEDWSSNVPIFQEKLSNG----------VLYNVLSQ 167
G+F E + + + + K + G + + +
Sbjct: 115 SDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGM 174
Query: 168 DFLAPSSNISEFLVPKGHYFMMGDNRDKSKDSRWVEVGFVPEENLVGRASFVLFSIGGDT 227
+ P ++ ++VP G YFMMGDNRD S DSR+ GFVPE NLVGRA+ + S
Sbjct: 175 YYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRY--WGFVPEANLVGRATAIWMSFDKQE 232
Query: 228 PFSKVWLWIPNMRWDRLF 245
W +R R+
Sbjct: 233 G-----EWPTGLRLSRIG 245