HHsearch alignment for GI: 254780940 and conserved domain: PRK12371

>PRK12371 ribonuclease III; Reviewed.
Probab=100.00  E-value=0  Score=479.54  Aligned_cols=227  Identities=55%  Similarity=0.897  Sum_probs=218.4

Q ss_pred             CCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             97358899999836965898999984246121266766547788745868864547877641046887899888888874
Q gi|254780940|r    1 MSALRYSTLEKRIGYAFANRSLLEKALTHSSISHSYQESYERLEFLGDRILGLLISTLLFNHFDSAKEGELSVRFNSLVS   80 (227)
Q Consensus         1 m~~~~~~~l~~~lgy~f~~~~ll~~A~th~S~~~~~~~~~erLEflGDavL~~~v~~~l~~~~p~~~eG~lt~lr~~lV~   80 (227)
T Consensus         7 ~~~~~~~~le~~igy~F~d~~Ll~~AlTH~S~~~~~~~nyERLEFLGDaVL~lvvs~~Ly~~fP~~~EG~LT~~Rs~lV~   86 (235)
T PRK12371          7 LANKTASILEERTGHRFANKERLDRALTHSSVQAPAGGNYERLEFLGDRVLGLCVAEMLFEAFPDASEGELSVRLNALVN   86 (235)
T ss_pred             HCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             25252999999979800888999987178686667767615553023999999999999986898883257999999971


Q ss_pred             HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHH
Q ss_conf             43345454313877200103663123753133333266999999996415542200122102564311100013452588
Q gi|254780940|r   81 AETCSQVARELDLASFIRVSSDLRKDVCSFMTSIQADVVESLIAALYLDGGIEVAGTFVDKYWKQRALKSGKFRRDAKTE  160 (227)
Q Consensus        81 n~~La~~a~~lgl~~~l~~~~~~~~~~~~~~~~ilad~fEA~iGAiy~d~G~~~~~~~i~~~~~~~~~~~~~~~~dpK~~  160 (227)
T Consensus        87 ~~~La~iA~~lgL~~~i~~g~~~~~~~~~~~~silaD~~EAliGAiyLD~G~~~a~~fv~~~~~~~~~~~~~~~~d~Ks~  166 (235)
T PRK12371         87 AETCAAIADEIGLHDLIRTGSDVKKLTGKRLLNVRADVVEALIAVIYLDGGLEAARPFIQRYWQKRALETDAARRDAKTE  166 (235)
T ss_pred             HHHHHHHHHHCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf             99999999875737765224462212885421088899999999999865799999999999888865214443577999


Q ss_pred             HHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             9875320223333431010207788845999999999899999968989999999999999748899
Q gi|254780940|r  161 LQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREGIWT  227 (227)
Q Consensus       161 Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klgi~t  227 (227)
T Consensus       167 LqE~~q~~~~~~P~Y~~~~~~G~~h~~~F~v~v~i~~~~~~~G~G~SKK~AEq~AA~~aL~k~g~~k  233 (235)
T PRK12371        167 LQEWAHQQGGVTPVYRIDSRSGPDHDPLFTVEVEVKGFAPETGEGRSKRIAEQVAAEKMLEREGVWK  233 (235)
T ss_pred             HHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHHCCCC
T ss_conf             9999997089997489830427898980899999999688998708999999999999999858866