HHsearch alignment for GI: 254780940 and conserved domain: PRK12372

>PRK12372 ribonuclease III; Reviewed.
Probab=100.00  E-value=0  Score=431.10  Aligned_cols=216  Identities=35%  Similarity=0.496  Sum_probs=204.5

Q ss_pred             CCHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             58899999836965898999984246121266766547788745868864547877641046887899888888874433
Q gi|254780940|r    4 LRYSTLEKRIGYAFANRSLLEKALTHSSISHSYQESYERLEFLGDRILGLLISTLLFNHFDSAKEGELSVRFNSLVSAET   83 (227)
Q Consensus         4 ~~~~~l~~~lgy~f~~~~ll~~A~th~S~~~~~~~~~erLEflGDavL~~~v~~~l~~~~p~~~eG~lt~lr~~lV~n~~   83 (227)
T Consensus         1 MpLs~LE~rLGY~Fkd~~LL~~ALTHRS~~~---~~NERLEFLGDAVLglvIae~Ly~~fP~~~EG~LSrlRA~LV~~~t   77 (425)
T PRK12372          1 MPLSQLESRLRYEFRNAELLRQALTHRSHSA---THNERLEFLGDSVLNCAVAALLFQRFGKLDEGDLSRVRANLVKQQS   77 (425)
T ss_pred             CCHHHHHHHHCCEECCHHHHHHHHCCCCCCC---CCCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHH
T ss_conf             9868999983977688899999851657888---8871022205999999999999987889885478999999969799


Q ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC--CCCCCCHHHHH
Q ss_conf             4545431387720010366312375313333326699999999641554220012210256431110--00134525889
Q gi|254780940|r   84 CSQVARELDLASFIRVSSDLRKDVCSFMTSIQADVVESLIAALYLDGGIEVAGTFVDKYWKQRALKS--GKFRRDAKTEL  161 (227)
Q Consensus        84 La~~a~~lgl~~~l~~~~~~~~~~~~~~~~ilad~fEA~iGAiy~d~G~~~~~~~i~~~~~~~~~~~--~~~~~dpK~~L  161 (227)
T Consensus        78 LAeiAr~l~Lg~~L~LG~GE~kSGGr~R~SILADA~EAlIGAIYLD~G~eaA~~~I~rlf~~~L~~i~~~~~~KD~KT~L  157 (425)
T PRK12372         78 LYEIAQALNISDGLRLGEGELRSGGFRRPSILADAFEAIIGAVFLDGGFEAAQGVIKRLYVPILDHIDPRTLGKDAKTLL  157 (425)
T ss_pred             HHHHHHHCCCCHHEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf             99999976962014236740104897760089999999887963135589999999999999986089552367800899


Q ss_pred             HHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEE-EEEEECCHHHHHHHHHHHHHHH
Q ss_conf             875320223333431010207788845999999999899-9999689899999999999997
Q gi|254780940|r  162 QEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAP-AQGMDCSKRAAEQVAAAEVLKR  222 (227)
Q Consensus       162 qe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~-g~g~g~SkK~Ae~~AA~~AL~k  222 (227)
T Consensus       158 QE~LQ~rk~~LP~Y~Vv~~~G~aH~Q~F~V~C~V~~l~~~~~G~G~SRR~AEQ~AAk~ALee  219 (425)
T PRK12372        158 QEYLQGHKIALPTYTVVATHGAAHNQQFEVECTVPKLDVKVSGSGASRRAAEQAAAKKALDE  219 (425)
T ss_pred             HHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf             99985179999961786315477577079998854887314742377169999999999999