HHsearch alignment of GI: 254780940 and MMDB domain: 3c4b_A_1-199
>3c4b_A (A:1-199) Endoribonuclease dicer; RNAse, dsRNA binding protein, ATP-binding, endonuclease, helicase, hydrolase, nucleotide-binding, phosphoprotein; HET: MSE; 1.68A {Mus musculus} PDB: 3c4t_A 2eb1_A
Probab=100.00 E-value=3.9e-39 Score=260.41 Aligned_cols=146 Identities=29% Similarity=0.415 Sum_probs=131.0
Q ss_pred CCHHHHHHHHCCCCCCHHHHHHHCCCHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 58899999836965898999984246121266-76654778874586886454787764104688789988888887443
Q gi|254780940|r 4 LRYSTLEKRIGYAFANRSLLEKALTHSSISHS-YQESYERLEFLGDRILGLLISTLLFNHFDSAKEGELSVRFNSLVSAE 82 (227)
Q Consensus 4 ~~~~~l~~~lgy~f~~~~ll~~A~th~S~~~~-~~~~~erLEflGDavL~~~v~~~l~~~~p~~~eG~lt~lr~~lV~n~ 82 (227)
..+..|+++|||+|+|++||.+||||+|+... ...+|||||||||+||+++|+++||.+||+++||.||.+|+.+|||+
T Consensus 13 ~~l~~l~~~lgy~f~~~~ll~~AlTh~S~~~~~~~~~~erLEfLGDavL~~~vs~~l~~~~p~~~~g~lt~~r~~~v~n~ 92 (199)
T 3c4b_A 13 SGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNT 92 (199)
T ss_dssp TTHHHHHHHHTCCCSSHHHHHHHHBCTTCTTCCSSCCSHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHSSHH
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHH
T ss_conf 99999999969872898999998436051436776514889999999999999999986412476788999999973399
Q ss_pred HHHHHHHHCCCCCEEEECCCCCC--------------------------------CCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 34545431387720010366312--------------------------------3753133333266999999996415
Q gi|254780940|r 83 TCSQVARELDLASFIRVSSDLRK--------------------------------DVCSFMTSIQADVVESLIAALYLDG 130 (227)
Q Consensus 83 ~La~~a~~lgl~~~l~~~~~~~~--------------------------------~~~~~~~~ilad~fEA~iGAiy~d~ 130 (227)
+|+.+|.++||++|+++++.+.. ......+|++||+|||+|||||+|+
T Consensus 93 ~La~~a~~~gL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~laD~~EA~iGAiy~d~ 172 (199)
T 3c4b_A 93 IFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEXQGXDSELRRSEEDEEKEEDIEVPKAXGDIFESLAGAIYXDS 172 (199)
T ss_dssp HHHHHHHHTTGGGTCBCCCHHHHHHHHHHHHHHHHHHC------------------CCSCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 99999998694899985683765446667766554310012113432011034440565442088899999999998607
Q ss_pred C--CCCCHHHHHCCCCCCCCC
Q ss_conf 5--422001221025643111
Q gi|254780940|r 131 G--IEVAGTFVDKYWKQRALK 149 (227)
Q Consensus 131 G--~~~~~~~i~~~~~~~~~~ 149 (227)
| +++|+.|+.+++.+....
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~ 193 (199)
T 3c4b_A 173 GXSLEVVWQVYYPXXQPLIEK 193 (199)
T ss_dssp TSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHCCCCHHHHHHHH
T ss_conf 876442101021066654323