HHsearch results for GI: 254780940 and protein with PDBid: 1uhz_A

>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.69  E-value=9.7e-17  Score=121.63  Aligned_cols=72  Identities=21%  Similarity=0.268  Sum_probs=67.9

Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf             3452588987532022333343101020778884599999999989999996898999999999999974889
Q gi|254780940|r  154 RRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREGIW  226 (227)
Q Consensus       154 ~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klgi~  226 (227)
                      ..||+++||||||+++..+|+|+++.++||+|++.|+|.|.|++.. .+|.|+|||+||+.||+.||++||..
T Consensus         5 ~~nP~s~LqE~~Q~~~~~~P~Y~~~~~~G~~h~~~F~~~v~v~~~~-~~g~g~sKK~Ae~~AA~~aL~~L~~~   76 (89)
T 1uhz_A            5 SSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEV-ATGTGPNKKIAKKNAAEAMLLQLGYK   76 (89)
T ss_dssp             SSCHHHHHHHHHHHTTSCCCEEEEEEEESCSTTCEEEEEEEETTEE-EEEEESSHHHHHHHHHHHHHHHHTSS
T ss_pred             CCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEECCEE-EECCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             8896899999999669999858997734799886699999999996-00689879999999999999996778