HHsearch results for GI: 254780940 and protein with PDBid: 1uhz_A
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.69 E-value=9.7e-17 Score=121.63 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=67.9
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf 3452588987532022333343101020778884599999999989999996898999999999999974889
Q gi|254780940|r 154 RRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREGIW 226 (227)
Q Consensus 154 ~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klgi~ 226 (227)
..||+++||||||+++..+|+|+++.++||+|++.|+|.|.|++.. .+|.|+|||+||+.||+.||++||..
T Consensus 5 ~~nP~s~LqE~~Q~~~~~~P~Y~~~~~~G~~h~~~F~~~v~v~~~~-~~g~g~sKK~Ae~~AA~~aL~~L~~~ 76 (89)
T 1uhz_A 5 SSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEV-ATGTGPNKKIAKKNAAEAMLLQLGYK 76 (89)
T ss_dssp SSCHHHHHHHHHHHTTSCCCEEEEEEEESCSTTCEEEEEEEETTEE-EEEEESSHHHHHHHHHHHHHHHHTSS
T ss_pred CCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEECCEE-EECCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 8896899999999669999858997734799886699999999996-00689879999999999999996778