HHsearch results for GI: 254780940 and protein with PDBid: 2l3j_A

>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}

Probab=99.22  E-value=4.5e-11  Score=86.80  Aligned_cols=68  Identities=22%  Similarity=0.238  Sum_probs=59.8

Q ss_pred             CCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHC
Q ss_conf             00013452588987532022333343101020778884599999999989999996898999999999999974
Q gi|254780940|r  150 SGKFRRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKRE  223 (227)
Q Consensus       150 ~~~~~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~kl  223 (227)
                      ......+|++.|+|++|.     +.|+++.++||+|.+.|+|.|.|+|... +|.|+|||.|++.||+.||++|
T Consensus       156 ~~~~~~~~~~~L~e~~~~-----~~y~~~~~~G~~h~~~F~~~v~v~~~~~-~G~G~sKK~Ak~~AA~~aL~~L  223 (236)
T 2l3j_A          156 PPPSGKNPVMILNELRPG-----LKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATV  223 (236)
T ss_dssp             CCCSSCCHHHHHHHHCCC-----EEEEEECCSSSSSSCCEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHCCC-----CCEEEEECCCCCCCCEEEEEEEECCEEE-EEEECCHHHHHHHHHHHHHHHH
T ss_conf             775565555799976659-----8489955307999986999999999999-9982999999999999999995