HHsearch results for GI: 254780940 and protein with PDBid: 2l3j_A

>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}

Probab=99.08  E-value=2.6e-10  Score=82.13  Aligned_cols=65  Identities=28%  Similarity=0.376  Sum_probs=56.6

Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf             34525889875320223333431010207788845999999999899999968989999999999999748
Q gi|254780940|r  154 RRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREG  224 (227)
Q Consensus       154 ~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klg  224 (227)
                      .+||..+|+|+     ...+.|++++++||+|.++|+|.|.|+|+.+ +|.|.|||+|++.||+.||+.|.
T Consensus         6 pKn~~~~lnEl-----~~~~~y~~~~~~Gp~H~~~F~~~v~vn~~~~-~g~G~SKK~Ak~~AAe~aL~~l~   70 (236)
T 2l3j_A            6 PKNALMQLNEI-----KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFV   70 (236)
T ss_dssp             THHHHHHHHHH-----CSSCEEEEEEEESCTTSCEEEEEEEETTEEE-EEEESHHHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHC-----CCCCEEEEEEEECCCCCCEEEEEEEECCEEE-EECCCCHHHHHHHHHHHHHHHHH
T ss_conf             81999999856-----5898499966368898985999999999999-95578578889999999999986