HHSEARCH alignment of GI: 254780940 and SCOP domain: d1uila_

Alignment

Probab=99.63  E-value=1.7e-16  Score=118.60  Aligned_cols=74  Identities=24%  Similarity=0.315  Sum_probs=64.0

Q ss_pred             CCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEE-----CCEEEEEEEECCHHHHHHHHHHHHHHHC--
Q ss_conf             001345258898753202233334310102077888459999999-----9989999996898999999999999974--
Q gi|254780940|r  151 GKFRRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEI-----SGLAPAQGMDCSKRAAEQVAAAEVLKRE--  223 (227)
Q Consensus       151 ~~~~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v-----~g~~~g~g~g~SkK~Ae~~AA~~AL~kl--  223 (227)
                      ++...|||++||||||+++. +|.|++ ...||+|++.|+|.|.|     ++..+++|.|+|||+||+.||+.||++|  
T Consensus        22 ~wt~~n~Ks~LqE~~Qk~k~-~p~Y~i-~~~Gp~H~~~F~~~v~i~~~~~~~~~~~~G~G~sKK~AEq~AA~~~l~~L~~   99 (113)
T d1uila_          22 NWTLENAKARLNQYFQKEKI-QGEYKY-TQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYH   99 (113)
T ss_dssp             CCCHHHHHHHHHHHHHHSCC-CCCCEE-EEESCSTTCEEEEEEEEEETTTTEEEEEECCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHCCC-CCCEEE-EEECCCCCCEEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             97014799999999986799-996598-5542688995999999942125976776406260999999999999999997


Q ss_pred             -CCC
Q ss_conf             -889
Q gi|254780940|r  224 -GIW  226 (227)
Q Consensus       224 -gi~  226 (227)
                       |++
T Consensus       100 ~g~i  103 (113)
T d1uila_         100 LGVI  103 (113)
T ss_dssp             HTSS
T ss_pred             CCCC
T ss_conf             4886

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: ATP-dependent RNA helicase A, Dhx9
species: Mouse (Mus musculus) [TaxId: 10090]