HHsearch alignment for GI: 254780941 and conserved domain: CHL00195

Probab=96.89  E-value=0.0036  Score=40.40  Aligned_cols=171  Identities=13%  Similarity=0.167  Sum_probs=90.4

Q ss_pred             EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHH-HH
Q ss_conf             99833899868899999868920210588886021278999739948999987984010123575321002345555-32
Q gi|254780941|r   25 VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKH-AD  103 (311)
Q Consensus        25 VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~-aD  103 (311)
T Consensus       262 vLL~GpPG~GKtl~AKAvA~e~----------------------~~p~l~l~~~~l~~~~vGesE~~~r~~f~~A~~~aP  319 (491)
T CHL00195        262 LLLVGIQGTGKSLTAKAIANEW----------------------NLPLLRLDVGKLFGGIVGESESRMRQMIQLAETISP  319 (491)
T ss_pred             EEEECCCCCCHHHHHHHHHHHH----------------------CCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCC
T ss_conf             9997999987899999998663----------------------894699667997560067049999999999986198


Q ss_pred             HHCCCCHHHHHHH------------CCHHHHHHHHHHCCCCCEEEE--EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             1001100001000------------000012234544287202578--72110104345788886410012334311000
Q gi|254780941|r  104 IVCLVVDSHRELK------------VNIHDLLKEIAKRSSRLILIL--NKIDCVKPERLLEQAEIANKLVFIEKTFMVSA  169 (311)
Q Consensus       104 iil~VvDa~~~~~------------~~~~~il~~l~~~~~p~IiVl--NKiDlv~~~~l~~~~~~~~~~~~~~~i~~ISA  169 (311)
T Consensus       320 ~ilfiDEidk~~~~~~~~~d~g~s~rv~~~~Lt~m~e~~~~VfViattN~~~~L~pell--------R~GRFD~~~~v~l  391 (491)
T CHL00195        320 CILWIDEIDKAFSGLDSKGDSGTSNRVLATFITWLSEKKSPVFVVATANNIDSLPLELL--------RKGRFDEIFFLDL  391 (491)
T ss_pred             EEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHC--------CCCCCCEEEECCC
T ss_conf             58997465454258888888723289999999986468997699995899755898770--------8987770476489


Q ss_pred             CCCCCHHHHHHHHHHHC-CCCCCCCCCCCCCCCHHHHH---HHHHHHHHHHHHHHCCCCC
Q ss_conf             13874267899999836-62235689643343025678---9987599999973004564
Q gi|254780941|r  170 TKGHGCDDVLNYLCSTL-PLAPWVYSADQISDLPMFHF---TAEITREKLFLHLHKEIPY  225 (311)
Q Consensus       170 k~g~Gid~L~~~L~~~l-pe~~~~y~~~~~Td~~~~~~---i~EiIREki~~~l~~EiPY  225 (311)
T Consensus       392 P~~~~R~~I~~ihl~~~~~~~~~~~d~~~la~~t~gfsGAeIe~~v~~A~~~A~~~~r~~  451 (491)
T CHL00195        392 PNLEERELIFKIHLKRFRPNSWQNYDIEILSQLTNKFSGAEIEQSIIEAMHHAFSEKREF  451 (491)
T ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             598999999999985447887554699999976859888999999999999998758866