HHsearch alignment for GI: 254780941 and conserved domain: COG0532

>COG0532 InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis].
Probab=99.75  E-value=6.8e-18  Score=135.64  Aligned_cols=157  Identities=22%  Similarity=0.291  Sum_probs=112.5

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEE---EE--CCEEEEEEECCCCHHHCCCCCCCCCC
Q ss_conf             85121899833899868899999868920210588886021278999---73--99489999879840101235753210
Q gi|254780941|r   19 NSRSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIV---SE--KESQIVFLDTPGIFNAKDSYHKLMIR   93 (311)
Q Consensus        19 ~~ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~---~~--~~~qiifvDTPG~~~~~~~l~~~~~~   93 (311)
T Consensus         2 ~~R~PvVtimGHVDHGKTtLLD~IR~t~Va~~Ea-GGITQhI--GA~~v~~~~~~~~~itFiDTPGH-eAFt~mRa----   73 (509)
T COG0532           2 ELRPPVVTIMGHVDHGKTTLLDKIRKTNVAAGEA-GGITQHI--GAYQVPLDVIKIPGITFIDTPGH-EAFTAMRA----   73 (509)
T ss_pred             CCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCC-CCEEEEE--EEEEEEECCCCCCEEEEECCCCH-HHHHHHHH----
T ss_conf             9889889996743588420166674176435667-8500174--34999864688652899748957-88887875----


Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHH--HHHHHHHH----HHHCCCCCCCCCC
Q ss_conf             02345555321001100001000000012234544287202578721101043--45788886----4100123343110
Q gi|254780941|r   94 LSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKPE--RLLEQAEI----ANKLVFIEKTFMV  167 (311)
Q Consensus        94 ~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~~~--~l~~~~~~----~~~~~~~~~i~~I  167 (311)
T Consensus        74 ---RGa~vtDIaILVVa~dDGv~pQTiEAI~hak~a~vP~iVAiNKiDk~~~np~~v~~el~~~gl~~E~~gg~v~~Vpv  150 (509)
T COG0532          74 ---RGASVTDIAILVVAADDGVMPQTIEAINHAKAAGVPIVVAINKIDKPEANPDKVKQELQEYGLVPEEWGGDVIFVPV  150 (509)
T ss_pred             ---CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHCCCCEEEEEE
T ss_conf             ---57754457999997567856617999999987799989998543279988789999887779887661881499974


Q ss_pred             CCCCCCCHHHHHHHHHHHC
Q ss_conf             0013874267899999836
Q gi|254780941|r  168 SATKGHGCDDVLNYLCSTL  186 (311)
Q Consensus       168 SAk~g~Gid~L~~~L~~~l  186 (311)
T Consensus       151 SA~tg~Gi~eLL~~ill~a  169 (509)
T COG0532         151 SAKTGEGIDELLELILLLA  169 (509)
T ss_pred             ECCCCCCHHHHHHHHHHHH
T ss_conf             3247879799999999888