HHsearch alignment for GI: 254780941 and conserved domain: COG1084
>COG1084 Predicted GTPase [General function prediction only].
Probab=99.86 E-value=5.3e-21 Score=155.73 Aligned_cols=164 Identities=26% Similarity=0.345 Sum_probs=122.6
Q ss_pred EEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHH-HCCCCCCCCCCHHHHHHHH
Q ss_conf 189983389986889999986892021058888602127899973994899998798401-0123575321002345555
Q gi|254780941|r 23 GCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFN-AKDSYHKLMIRLSWSTIKH 101 (311)
Q Consensus 23 g~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~-~~~~l~~~~~~~~~~~l~~ 101 (311)
T Consensus 169 pTivVaG~PNVGKSSlv~~lT~AkpE-vA~YPFTTK~i~vGhfe~~~~R~QvIDTPGlLDRPl~ErN~IE~-qAi~AL~h 246 (346)
T COG1084 169 PTIVVAGYPNVGKSSLVRKLTTAKPE-VAPYPFTTKGIHVGHFERGYLRIQVIDTPGLLDRPLEERNEIER-QAILALRH 246 (346)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCC-CCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHCHHHH-HHHHHHHH
T ss_conf 73898569987589999887548976-67888533654676550487058984288645788577368999-99999997
Q ss_pred -HHHHCCCCHHHHHHHCCHH---HHHHHHHH-CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
Q ss_conf -3210011000010000000---12234544-287202578721101043457888864100123343110001387426
Q gi|254780941|r 102 -ADIVCLVVDSHRELKVNIH---DLLKEIAK-RSSRLILILNKIDCVKPERLLEQAEIANKLVFIEKTFMVSATKGHGCD 176 (311)
Q Consensus 102 -aDiil~VvDa~~~~~~~~~---~il~~l~~-~~~p~IiVlNKiDlv~~~~l~~~~~~~~~~~~~~~i~~ISAk~g~Gid 176 (311)
T Consensus 247 l~~~IlF~~D~Se~cgy~lE~Q~~L~~eIk~~f~~p~v~V~nK~D~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d 325 (346)
T COG1084 247 LAGVILFLFDPSETCGYSLEEQISLLEEIKELFKAPIVVVINKIDIADEEKLEEIEASVLEE-GGEEPLKISATKGCGLD 325 (346)
T ss_pred HCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-CCCCCCCEEEEEHHHHH
T ss_conf 42858999768500289999999999999985388769997410124666789999998763-26554313543000178
Q ss_pred HHHHHHHHHCCCC
Q ss_conf 7899999836622
Q gi|254780941|r 177 DVLNYLCSTLPLA 189 (311)
Q Consensus 177 ~L~~~L~~~lpe~ 189 (311)
T Consensus 326 ~~~~~v~~~a~~~ 338 (346)
T COG1084 326 KLREEVRKTALEP 338 (346)
T ss_pred HHHHHHHHHHHCH
T ss_conf 8999998875021