HHsearch alignment for GI: 254780941 and conserved domain: COG1160
>COG1160 Predicted GTPases [General function prediction only].
Probab=99.98 E-value=8.7e-32 Score=225.51 Aligned_cols=167 Identities=23% Similarity=0.339 Sum_probs=142.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCC---CCCCCCCCHHH
Q ss_conf 512189983389986889999986892021058888602127899973994899998798401012---35753210023
Q gi|254780941|r 20 SRSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKD---SYHKLMIRLSW 96 (311)
Q Consensus 20 ~ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~---~l~~~~~~~~~ 96 (311)
T Consensus 176 ~~~ikiaiiGrPNvGKSsLiN~ilgeeR~Iv~~~aGTTRD~I~~~~e~~~~~~~liDTAGiRrk~ki~e~~E~~Sv~rt~ 255 (444)
T COG1160 176 TDPIKIAIIGRPNVGKSSLINAILGEERVIVSDIAGTTRDSIDIEFERDGRKYVLIDTAGIRRKGKITESVEKYSVARTL 255 (444)
T ss_pred CCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEEHHHH
T ss_conf 77508999927878705888775068259845999862203312589988189999877877466412426887505467
Q ss_pred HHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHH--HH---HHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 45555321001100001000000012234544287202578721101043--45---78888641001233431100013
Q gi|254780941|r 97 STIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKPE--RL---LEQAEIANKLVFIEKTFMVSATK 171 (311)
Q Consensus 97 ~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~~~--~l---~~~~~~~~~~~~~~~i~~ISAk~ 171 (311)
T Consensus 256 ~aI~~a~vvllviDa~~~~~~qD~~ia~~i~~~g~~~vIvvNKWDl~~~~~~~~~~~k~~i~~~l~~l~~a~i~~iSA~~ 335 (444)
T COG1160 256 KAIERADVVLLVIDATEGISEQDLRIAGLIEEAGRGIVIVVNKWDLVEEDEATMEEFKKKLRRKLPFLDFAPIVFISALT 335 (444)
T ss_pred HHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 67865688999998887836889999999997589749999753257851667999999999872213677279997047
Q ss_pred CCCHHHHHHHHHHHC
Q ss_conf 874267899999836
Q gi|254780941|r 172 GHGCDDVLNYLCSTL 186 (311)
Q Consensus 172 g~Gid~L~~~L~~~l 186 (311)
T Consensus 336 ~~~i~~l~~~i~~~~ 350 (444)
T COG1160 336 GQGLDKLFEAIKEIY 350 (444)
T ss_pred CCCHHHHHHHHHHHH
T ss_conf 877278899999999