HHsearch alignment for GI: 254780941 and conserved domain: COG1161

Probab=99.50  E-value=3.1e-14  Score=111.94  Aligned_cols=62  Identities=42%  Similarity=0.584  Sum_probs=50.7

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHC
Q ss_conf             51218998338998688999998689202105888860212789997399489999879840101
Q gi|254780941|r   20 SRSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAK   84 (311)
Q Consensus        20 ~ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~   84 (311)
T Consensus       130 ~~~~~v~vvG~PNVGKSslIN~L~~k~~~~~s~~PG~Tk~~q~i~~~~-~--i~LlDtPGii~~~  191 (322)
T COG1161         130 KRKIRVGVVGYPNVGKSTLINRLLGKKVAKTSNRPGTTKGIQWIKLDD-G--IYLLDTPGIIPPK  191 (322)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCEEEECCC-C--EEEEECCCCCCCC
T ss_conf             556089998789764899999986205552379996204516897278-6--2897388807886