HHsearch alignment for GI: 254780941 and conserved domain: COG1161

Probab=97.64  E-value=4.6e-05  Score=52.62  Aligned_cols=97  Identities=24%  Similarity=0.204  Sum_probs=66.3

Q ss_pred             EEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf             99879840101235753210023455553210011000010000000122345442872025787211010434578888
Q gi|254780941|r   74 FLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKPERLLEQAE  153 (311)
Q Consensus        74 fvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~~~~l~~~~~  153 (311)
T Consensus        14 i~~~~g~~~-------k~~~~~~~~~~~~d~vvevvDar~P~~s~~~~l~~~v~--~k~~i~vlNK~DL~~~~~~~~W~~   84 (322)
T COG1161          14 IQWFPGHMK-------KAKRQLKEVLKSVDVVVEVVDARDPLGTRNPELERIVK--EKPKLLVLNKADLAPKEVTKKWKK   84 (322)
T ss_pred             CCCCCCCHH-------HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHC--CCCCEEEEEHHHCCCHHHHHHHHH
T ss_conf             255677519-------99999987536676589974312688888730678855--788359985132489999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             641001233431100013874267899
Q gi|254780941|r  154 IANKLVFIEKTFMVSATKGHGCDDVLN  180 (311)
Q Consensus       154 ~~~~~~~~~~i~~ISAk~g~Gid~L~~  180 (311)
T Consensus        85 ~~~~~~~-~~~~~v~~~~~~~~~~i~~  110 (322)
T COG1161          85 YFKKEEG-IKPIFVSAKSRQGGKKIRK  110 (322)
T ss_pred             HHHHCCC-CCCEEEECCCCCCCCCCHH
T ss_conf             9986479-8655764334677654258