HHsearch alignment for GI: 254780941 and conserved domain: COG1162
>COG1162 Predicted GTPases [General function prediction only].
Probab=98.87 E-value=3.1e-09 Score=79.63 Aligned_cols=58 Identities=28% Similarity=0.393 Sum_probs=34.5
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHCC---CEEEECCC----CCCEEEEEEEEEEE-CCEEEEEEECCCCHH
Q ss_conf 1218998338998688999998689---20210588----88602127899973-994899998798401
Q gi|254780941|r 21 RSGCVALVGATNAGKSTLVNRFVGA---KVSIVTHK----VQTTRSIVRGIVSE-KESQIVFLDTPGIFN 82 (311)
Q Consensus 21 ksg~VaivG~pN~GKSTL~N~l~g~---~vsivS~k----~~TTr~~i~gi~~~-~~~qiifvDTPG~~~ 82 (311)
T Consensus 163 ~~~~svl~GqSGVGKSSLiN~L~p~~~~~t~eIS~~~~rGkHTTt~~~l--~~l~~gG~--iiDTPGf~~ 228 (301)
T COG1162 163 AGKITVLLGQSGVGKSTLINALLPELNQKTGEISEKLGRGRHTTTHVEL--FPLPGGGW--IIDTPGFRS 228 (301)
T ss_pred CCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEE--EECCCCCE--EEECCCCCC
T ss_conf 5884999888877699988741721211344210447898876324899--98389988--972899771