HHsearch alignment for GI: 254780941 and conserved domain: COG2262

Probab=99.91  E-value=3e-24  Score=176.80  Aligned_cols=161  Identities=33%  Similarity=0.418  Sum_probs=118.2

Q ss_pred             CCEE--EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEEC-CEEEEEEECCCCHHHCCCCCCCCCCHHHH
Q ss_conf             1218--99833899868899999868920210588886021278999739-94899998798401012357532100234
Q gi|254780941|r   21 RSGC--VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEK-ESQIVFLDTPGIFNAKDSYHKLMIRLSWS   97 (311)
Q Consensus        21 ksg~--VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~-~~qiifvDTPG~~~~~~~l~~~~~~~~~~   97 (311)
T Consensus       189 ~~~~p~vaLvGYTNAGKSTL~N~LT~~~~~-~~d~LFATLdpttR~~~l~~g~~vlLtDTVGFI~---~LP~~LV~AFks  264 (411)
T COG2262         189 RSGIPLVALVGYTNAGKSTLFNALTGADVY-VADQLFATLDPTTRRIELGDGRKVLLTDTVGFIR---DLPHPLVEAFKS  264 (411)
T ss_pred             CCCCCEEEEEEECCCCHHHHHHHHHCCCEE-CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCC---CCCHHHHHHHHH
T ss_conf             169975898732344499999887245713-0466642105740489807996499865756715---598679999999


Q ss_pred             HH---HHHHHHCCCCHHHHHHHC----CHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             55---553210011000010000----00012234544287202578721101043457888864100123343110001
Q gi|254780941|r   98 TI---KHADIVCLVVDSHRELKV----NIHDLLKEIAKRSSRLILILNKIDCVKPERLLEQAEIANKLVFIEKTFMVSAT  170 (311)
Q Consensus        98 ~l---~~aDiil~VvDa~~~~~~----~~~~il~~l~~~~~p~IiVlNKiDlv~~~~l~~~~~~~~~~~~~~~i~~ISAk  170 (311)
T Consensus       265 TLEE~~~aDlllhVVDaSdp~~~~~~~~v~~vL~el~~~~~p~i~v~NKiD~~~~~~~~~~~~~~~---~--~~v~iSA~  339 (411)
T COG2262         265 TLEEVKEADLLLHVVDASDPEILEKLEAVEDVLAEIGADEIPIILVLNKIDLLEDEEILAELERGS---P--NPVFISAK  339 (411)
T ss_pred             HHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCC---C--CEEEEEEC
T ss_conf             898762277799974068851899999999999974889997899976410157322234566348---9--74899806


Q ss_pred             CCCCHHHHHHHHHHHCCCCC
Q ss_conf             38742678999998366223
Q gi|254780941|r  171 KGHGCDDVLNYLCSTLPLAP  190 (311)
Q Consensus       171 ~g~Gid~L~~~L~~~lpe~~  190 (311)
T Consensus       340 ~~~gl~~L~~~i~~~l~~~~  359 (411)
T COG2262         340 TGEGLDLLRERIIELLSGLR  359 (411)
T ss_pred             CCCCHHHHHHHHHHHHHHCC
T ss_conf             67598999999999863124