HHsearch alignment for GI: 254780941 and conserved domain: KOG0446

Probab=97.07  E-value=0.00027  Score=47.70  Aligned_cols=126  Identities=20%  Similarity=0.314  Sum_probs=64.1

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHCCCE-----EEECCCCC-----------------CEEEE-----------------
Q ss_conf             5121899833899868899999868920-----21058888-----------------60212-----------------
Q gi|254780941|r   20 SRSGCVALVGATNAGKSTLVNRFVGAKV-----SIVTHKVQ-----------------TTRSI-----------------   60 (311)
Q Consensus        20 ~ksg~VaivG~pN~GKSTL~N~l~g~~v-----sivS~k~~-----------------TTr~~-----------------   60 (311)
T Consensus        27 i~lP~I~vvG~QSsGKSSvLE~lvG~~flpRg~givTRrPlvlqL~~~~~~~~e~~~f~~h~~~~~~~D~~~vrkeI~~e  106 (657)
T KOG0446          27 IPLPQIVVVGGQSSGKSSVLESLVGFVFLPRGVGIVTRRPLILQLSIVAGGDEEEASFLTHDKKKRFTDFEEVRKEIRSE  106 (657)
T ss_pred             CCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf             77885699779888611799985266356776675414650244232478865312322127752358879999998862


Q ss_pred             ---------------E-EEEEEECCEEEEEEECCCCHHHC-----CCCCCCCCCHHHHHHHHHH-HHCCCCHHHHHH-HC
Q ss_conf             ---------------7-89997399489999879840101-----2357532100234555532-100110000100-00
Q gi|254780941|r   61 ---------------V-RGIVSEKESQIVFLDTPGIFNAK-----DSYHKLMIRLSWSTIKHAD-IVCLVVDSHREL-KV  117 (311)
Q Consensus        61 ---------------i-~gi~~~~~~qiifvDTPG~~~~~-----~~l~~~~~~~~~~~l~~aD-iil~VvDa~~~~-~~  117 (311)
T Consensus       107 t~~~~g~~kgiS~~pI~L~i~s~~v~~lTlvDlPG~tkvpv~dqp~di~~qI~~mi~~yi~~~~~iILav~~an~d~ats  186 (657)
T KOG0446         107 TDRITGSNKGISPVPITLKIFSALVANLTLVDLPGLTKVPVADQPDDIEEEIKSMIEEYIEKPNRIILAVTPANSDIATS  186 (657)
T ss_pred             HHHHHCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHCC
T ss_conf             88760899886888715750688885143167898734677999845899999999985566302565215045454347


Q ss_pred             CHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             0001223454428720257872110104
Q gi|254780941|r  118 NIHDLLKEIAKRSSRLILILNKIDCVKP  145 (311)
Q Consensus       118 ~~~~il~~l~~~~~p~IiVlNKiDlv~~  145 (311)
T Consensus       187 ~alkiarevDp~g~RTigvitK~Dlmdk  214 (657)
T KOG0446         187 PALVVAREVDPGGSRTLEVITKFDFMDK  214 (657)
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf             8999998618876612588650776433