HHsearch alignment for GI: 254780941 and conserved domain: KOG1490
>KOG1490 consensus.
Probab=99.59 E-value=1.6e-15 Score=120.24 Aligned_cols=165 Identities=24% Similarity=0.340 Sum_probs=105.7
Q ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHH-CCCCCCCCCC--
Q ss_conf 3685121899833899868899999868920210588886021278999739948999987984010-1235753210--
Q gi|254780941|r 17 QDNSRSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNA-KDSYHKLMIR-- 93 (311)
Q Consensus 17 ~~~~ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~-~~~l~~~~~~-- 93 (311)
T Consensus 165 Dp~trT--lllcG~PNVGKSSf~~~vtradve-vqpYaFTTksL~vGH~dykYlrwQViDTPGILD~plEdrN~IEmqsI 241 (620)
T KOG1490 165 DPNTRT--LLVCGYPNVGKSSFNNKVTRADDE-VQPYAFTTKLLLVGHLDYKYLRWQVIDTPGILDRPEEDRNIIEMQII 241 (620)
T ss_pred CCCCCE--EEEECCCCCCCHHHCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHH
T ss_conf 888671--798527887737643552015555-57766551012100203240234403884124760543217999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHCCHHHH---HHHHHH--CCCCCEEEEEECCCHHHHHHHHHHHHH-HHCCC--CCCCC
Q ss_conf 02345555321001100001000000012---234544--287202578721101043457888864-10012--33431
Q gi|254780941|r 94 LSWSTIKHADIVCLVVDSHRELKVNIHDL---LKEIAK--RSSRLILILNKIDCVKPERLLEQAEIA-NKLVF--IEKTF 165 (311)
Q Consensus 94 ~~~~~l~~aDiil~VvDa~~~~~~~~~~i---l~~l~~--~~~p~IiVlNKiDlv~~~~l~~~~~~~-~~~~~--~~~i~ 165 (311)
T Consensus 242 TALAHLra--aVLYfmDLSe~CGySva~QvkLfhsIKpLFaNK~~IlvlNK~D~m~~edL~~~~~~ll~~~~~~~~v~v~ 319 (620)
T KOG1490 242 TALAHLRS--AVLYFMDLSEMCGYSVAAQVKLYHSIKPLFANKVTILVLNKIDAMRPEDLDQKNQELLQTIIDDGNVKVV 319 (620)
T ss_pred HHHHHHHH--HHEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
T ss_conf 99987565--6411343221208889999999987678862884699952002568656687889999998860483388
Q ss_pred CCCCCCCCCHHHHHHHHHHHC
Q ss_conf 100013874267899999836
Q gi|254780941|r 166 MVSATKGHGCDDVLNYLCSTL 186 (311)
Q Consensus 166 ~ISAk~g~Gid~L~~~L~~~l 186 (311)
T Consensus 320 ~tS~~~eegVm~Vrt~ACe~L 340 (620)
T KOG1490 320 QTSCVQEEGVMDVRTTACEAL 340 (620)
T ss_pred EECCCCHHCEEEHHHHHHHHH
T ss_conf 732554002000777899999