HHsearch alignment for GI: 254780941 and conserved domain: KOG3883

Probab=98.48  E-value=1.6e-06  Score=62.11  Aligned_cols=166  Identities=22%  Similarity=0.296  Sum_probs=99.8

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECC---EEEEEEECCCCHHHCCCCCCCCCCHHHH
Q ss_conf             1218998338998688999998689202105888860212789997399---4899998798401012357532100234
Q gi|254780941|r   21 RSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKE---SQIVFLDTPGIFNAKDSYHKLMIRLSWS   97 (311)
Q Consensus        21 ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~---~qiifvDTPG~~~~~~~l~~~~~~~~~~   97 (311)
T Consensus         8 k~~kVvVcG~k~VGKTaileQl~yg~~~~~~e~~pTiEDiY~~svet~rgarE~l~lyDTaGlq~~~~eLpr-------h   80 (198)
T KOG3883           8 KVCKVVVCGMKSVGKTAILEQLLYGNHVPGTELHPTIEDIYVASVETDRGAREQLRLYDTAGLQGGQQELPR-------H   80 (198)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEEECCCCHHHEEEEEECCCCCCCHHHHHH-------H
T ss_conf             640799977745228999999985167889766663442246764068781016888652445576002027-------6


Q ss_pred             HHHHHHHHCCCCHHHHHHHCCHHHHHH-HHH----HCCCCCEEEEEECCCHHHHHH-HHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             555532100110000100000001223-454----428720257872110104345-78888641001233431100013
Q gi|254780941|r   98 TIKHADIVCLVVDSHRELKVNIHDLLK-EIA----KRSSRLILILNKIDCVKPERL-LEQAEIANKLVFIEKTFMVSATK  171 (311)
Q Consensus        98 ~l~~aDiil~VvDa~~~~~~~~~~il~-~l~----~~~~p~IiVlNKiDlv~~~~l-~~~~~~~~~~~~~~~i~~ISAk~  171 (311)
T Consensus        81 y~q~aDafVLVYs~~d~eSf~rv~llKk~Idk~KdKKEvpiVVLaN~rdr~~p~~vd~d~A~~Wa~rEk-vkl~eVta~d  159 (198)
T KOG3883          81 YFQFADAFVLVYSPMDPESFQRVELLKKEIDKHKDKKEVPIVVLANKRDRAEPREVDMDVAQIWAKREK-VKLWEVTAMD  159 (198)
T ss_pred             HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCCHHCCHHHHHHHHHHHH-EEEEEEEECC
T ss_conf             710576579996379988988999999998625565512289973001013640127889988876530-2478987134


Q ss_pred             CCCHHHHHHHHHHHC--CCCCCCCC
Q ss_conf             874267899999836--62235689
Q gi|254780941|r  172 GHGCDDVLNYLCSTL--PLAPWVYS  194 (311)
Q Consensus       172 g~Gid~L~~~L~~~l--pe~~~~y~  194 (311)
T Consensus       160 R~sL~epf~~l~~rl~~pqskS~Fp  184 (198)
T KOG3883         160 RPSLYEPFTYLASRLHQPQSKSTFP  184 (198)
T ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             4224538999987505875445576