HHsearch alignment for GI: 254780941 and conserved domain: PRK01889
>PRK01889 ribosome-associated GTPase; Reviewed.
Probab=98.87 E-value=2.7e-09 Score=79.96 Aligned_cols=83 Identities=19% Similarity=0.278 Sum_probs=55.6
Q ss_pred HHHHHHHCCCCHHHHHHHCC-HHHHHHHHHHCCCCCEEEEEECCCHHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
Q ss_conf 55532100110000100000-001223454428720257872110104-3457888864100123343110001387426
Q gi|254780941|r 99 IKHADIVCLVVDSHRELKVN-IHDLLKEIAKRSSRLILILNKIDCVKP-ERLLEQAEIANKLVFIEKTFMVSATKGHGCD 176 (311)
Q Consensus 99 l~~aDiil~VvDa~~~~~~~-~~~il~~l~~~~~p~IiVlNKiDlv~~-~~l~~~~~~~~~~~~~~~i~~ISAk~g~Gid 176 (311)
T Consensus 109 AANiD~v~IV~s~~~~fn~~rieRyLv~a~~~g~~pvivLnK~DL~~d~~~~~~~~~~~---~~g~~v~~vSa~~~~gl~ 185 (353)
T PRK01889 109 AANVDTVFIVCSLNHDFNLRRIERYLALAWESGAEPVVVLTKADLCEDVEEKIAEVEAL---APGVPVLAVNALDGEGVD 185 (353)
T ss_pred EECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHH---CCCCEEEEEECCCCCCHH
T ss_conf 97176899995289997978999999999986996799996655667999999999985---599759999789984789
Q ss_pred HHHHHHHH
Q ss_conf 78999998
Q gi|254780941|r 177 DVLNYLCS 184 (311)
Q Consensus 177 ~L~~~L~~ 184 (311)
T Consensus 186 ~L~~~l~~ 193 (353)
T PRK01889 186 ALQAWLKP 193 (353)
T ss_pred HHHHHHHC
T ss_conf 99998634