HHsearch alignment for GI: 254780941 and conserved domain: PRK05703

>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=98.34  E-value=1.6e-07  Score=68.54  Aligned_cols=123  Identities=26%  Similarity=0.385  Sum_probs=69.3

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHH-------CC-CEEEECC---CCC-----CEEEEEEEE----E-----------EE
Q ss_conf             8512189983389986889999986-------89-2021058---888-----602127899----9-----------73
Q gi|254780941|r   19 NSRSGCVALVGATNAGKSTLVNRFV-------GA-KVSIVTH---KVQ-----TTRSIVRGI----V-----------SE   67 (311)
Q Consensus        19 ~~ksg~VaivG~pN~GKSTL~N~l~-------g~-~vsivS~---k~~-----TTr~~i~gi----~-----------~~   67 (311)
T Consensus       207 ~~~~~vvalVGPTGVGKTTTiAKLAA~~~l~~~~~kV~lIT~DtyRigA~eQLk~Ya~ilgvp~~v~~~~~~l~~al~~~  286 (412)
T PRK05703        207 LEQGGVVALVGPTGVGKTTTLAKLAARYALEEGKDKVALITLDTYRIGAVEQLKTYAKIMGIPVKVAYDPKELAKALEQL  286 (412)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHH
T ss_conf             45673699988888756769999999999972998179998376777799999999997197379847999999999871


Q ss_pred             CCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHHH
Q ss_conf             994899998798401012357532100234555532100110000100000001223454428720257872110104
Q gi|254780941|r   68 KESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKP  145 (311)
Q Consensus        68 ~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~~  145 (311)
T Consensus       287 ~~~dlILIDTaG~s-~~d~~~~~eL~~~~~~~~~~-~~~LVlsat~~~-~dl~~i~~~f~~~~~-~~lI~TKlDEt~~  360 (412)
T PRK05703        287 ANCDLILIDTAGRS-QRDPRLISELKALIENSKPI-DVYLVLSATTKY-RDLKDIVKHFSRLPL-DGLILTKLDETSS  360 (412)
T ss_pred             CCCCEEEEECCCCC-CCCHHHHHHHHHHHHHCCCC-CEEEEECCCCCH-HHHHHHHHHHCCCCC-CEEEEEEECCCCC
T ss_conf             58997999689889-78999999999998624887-189997598998-999999998467999-8799971128998