HHsearch alignment for GI: 254780941 and conserved domain: PRK09601

Probab=99.73  E-value=5.8e-17  Score=129.64  Aligned_cols=88  Identities=25%  Similarity=0.262  Sum_probs=72.8

Q ss_pred             EEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCE-----------------EEEEEECCCCHHHCC
Q ss_conf             189983389986889999986892021058888602127899973994-----------------899998798401012
Q gi|254780941|r   23 GCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKES-----------------QIVFLDTPGIFNAKD   85 (311)
Q Consensus        23 g~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~-----------------qiifvDTPG~~~~~~   85 (311)
T Consensus         3 mkiGivGlPnvGKSTlFnalT~~~~-~~~nyPf~Ti~pn~g~v~VpD~r~~~l~~~~~p~k~i~a~v~~vDiaGLv~gAs   81 (364)
T PRK09601          3 LKCGIVGLPNVGKSTLFNALTKAGA-EAANYPFCTIEPNVGIVPVPDPRLDKLAEIVKPKKIVPTTIEFVDIAGLVKGAS   81 (364)
T ss_pred             CEEEEECCCCCCHHHHHHHHHCCCC-CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCC
T ss_conf             2488877999988999999967998-645899888788006885785458999876287650112589996577678753


Q ss_pred             CCCCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             357532100234555532100110000
Q gi|254780941|r   86 SYHKLMIRLSWSTIKHADIVCLVVDSH  112 (311)
Q Consensus        86 ~l~~~~~~~~~~~l~~aDiil~VvDa~  112 (311)
T Consensus        82 ~-G~GLGN~FL~~iR~~DaiihVVr~F  107 (364)
T PRK09601         82 K-GEGLGNKFLANIREVDAIVHVVRCF  107 (364)
T ss_pred             C-CCCCHHHHHHHHHHCCEEEEEEECC
T ss_conf             4-6774289999887347567750002