HHsearch alignment for GI: 254780941 and conserved domain: PRK12288
>PRK12288 ribosome-associated GTPase; Reviewed.
Probab=97.95 E-value=8.4e-06 Score=57.39 Aligned_cols=56 Identities=25% Similarity=0.366 Sum_probs=38.7
Q ss_pred EEEEECCCCCCHHHHHHHHHCC---CEEEECCC----CCCEEEEEEEEEEECCEEEEEEECCCCHH
Q ss_conf 8998338998688999998689---20210588----88602127899973994899998798401
Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGA---KVSIVTHK----VQTTRSIVRGIVSEKESQIVFLDTPGIFN 82 (311)
Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~---~vsivS~k----~~TTr~~i~gi~~~~~~qiifvDTPG~~~ 82 (311)
T Consensus 209 tsvf~GqSGVGKSSLiN~L~p~~~~~tgeIS~~~~~GrHTTt~~~L~~l~~gG~---lIDTPG~re 271 (344)
T PRK12288 209 ISIFVGQSGVGKSSLINALLPEAEILVGDVSENSGLGQHTTTTARLYHFPHGGD---LIDSPGVRE 271 (344)
T ss_pred EEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCE---EEECCCCCC
T ss_conf 599980687678888761075334223201433388664011689999289987---973898765