HHsearch alignment for GI: 254780941 and conserved domain: PRK12289

Probab=98.91  E-value=1.7e-09  Score=81.26  Aligned_cols=89  Identities=19%  Similarity=0.241  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHCCCCHHHHHHH-C-CHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             345555321001100001000-0-00012234544287202578721101043457888864100123343110001387
Q gi|254780941|r   96 WSTIKHADIVCLVVDSHRELK-V-NIHDLLKEIAKRSSRLILILNKIDCVKPERLLEQAEIANKLVFIEKTFMVSATKGH  173 (311)
Q Consensus        96 ~~~l~~aDiil~VvDa~~~~~-~-~~~~il~~l~~~~~p~IiVlNKiDlv~~~~l~~~~~~~~~~~~~~~i~~ISAk~g~  173 (311)
T Consensus        83 RP~VANvDq~liV~s~~~P~~~~~~LDRfLv~ae~~~i~~vivlnK~DL~~~~e~~~~~~~~~~~-G-Y~~i~iS~~~~~  160 (351)
T PRK12289         83 RPPIANVDQILLVFALAEPPLDPWQLSRFLVKAESTGLEIQLCLNKADLVSPTQQQQWQDRLAQW-G-YQPLFISVEQGI  160 (351)
T ss_pred             CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHC-C-CCEEEEECCCCC
T ss_conf             77756703599999657899887799999999998799789998657749989999999999977-9-828999678996


Q ss_pred             CHHHHHHHHHHHC
Q ss_conf             4267899999836
Q gi|254780941|r  174 GCDDVLNYLCSTL  186 (311)
Q Consensus       174 Gid~L~~~L~~~l  186 (311)
T Consensus       161 gl~~L~~~L~~k~  173 (351)
T PRK12289        161 GLEALLKQLRNKI  173 (351)
T ss_pred             CHHHHHHHHCCCE
T ss_conf             8999999875986