HHsearch alignment for GI: 254780941 and conserved domain: TIGR00750

>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=99.09  E-value=9.1e-11  Score=89.53  Aligned_cols=190  Identities=19%  Similarity=0.248  Sum_probs=90.6

Q ss_pred             CCCE---EEEEECCCCCCHHHHHHHHH------CCCEEE-----ECCCCCCEEEEEEEEEE---ECC--EEEEEEECCCC
Q ss_conf             5121---89983389986889999986------892021-----05888860212789997---399--48999987984
Q gi|254780941|r   20 SRSG---CVALVGATNAGKSTLVNRFV------GAKVSI-----VTHKVQTTRSIVRGIVS---EKE--SQIVFLDTPGI   80 (311)
Q Consensus        20 ~ksg---~VaivG~pN~GKSTL~N~l~------g~~vsi-----vS~k~~TTr~~i~gi~~---~~~--~qiifvDTPG~   80 (311)
T Consensus        33 p~~GnA~~vG~TG~PGaGKSTl~~~l~~~lrRrG~~VaViAvDP~SPfTG---GsiLGDr~Rm~~~asrkq--lW~dPg~  107 (333)
T TIGR00750        33 PKTGNAHVVGITGVPGAGKSTLVEKLIMELRRRGLKVAVIAVDPSSPFTG---GSILGDRLRMQRLASRKQ--LWTDPGV  107 (333)
T ss_pred             HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC---HHHHHHHHHHHHHHHHHH--HHCCCCC
T ss_conf             43279078766468888577799999899976597689998879759755---145456887754422223--3228985


Q ss_pred             -HHHCCCCCCC--CCCHHHHH--------------------------HHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCC
Q ss_conf             -0101235753--21002345--------------------------555321001100001000000012234544287
Q gi|254780941|r   81 -FNAKDSYHKL--MIRLSWST--------------------------IKHADIVCLVVDSHRELKVNIHDLLKEIAKRSS  131 (311)
Q Consensus        81 -~~~~~~l~~~--~~~~~~~~--------------------------l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~  131 (311)
T Consensus       108 FIRs~ptrG~lGGls~at~~~~~lldA~G~DVI~vETVGVGQSEVdi~~~aDT~v~v~~pg---~GDd~Q~iKa-G~mEi  183 (333)
T TIGR00750       108 FIRSMPTRGSLGGLSKATRELVKLLDAAGYDVILVETVGVGQSEVDIINMADTFVVVTIPG---TGDDVQGIKA-GVMEI  183 (333)
T ss_pred             EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCEEEEEECCC---CCCHHHHHHH-HHHEE
T ss_conf             6767766675257879999999999863898799984157524878873415058985488---7834666654-43023


Q ss_pred             CCEEEEEECCCHHHHHH---HHH----H---------------------HHHHHCCCCC-CCCCCCCCCCCCHHHHHHHH
Q ss_conf             20257872110104345---788----8---------------------8641001233-43110001387426789999
Q gi|254780941|r  132 RLILILNKIDCVKPERL---LEQ----A---------------------EIANKLVFIE-KTFMVSATKGHGCDDVLNYL  182 (311)
Q Consensus       132 p~IiVlNKiDlv~~~~l---~~~----~---------------------~~~~~~~~~~-~i~~ISAk~g~Gid~L~~~L  182 (311)
T Consensus       184 aDI~VVNKaD~~~a~~v~~~a~~~l~l~~esvqmlsqmthadearvq~G~~~~r~~gW~Ppv~~tsA~~G~Gi~EL~daI  263 (333)
T TIGR00750       184 ADIYVVNKADGEGAEEVKTLARLMLALDLESVQMLSQMTHADEARVQKGEIYRREKGWRPPVLKTSAVEGRGIDELWDAI  263 (333)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf             24878816887665899999999888888899999865333344430265511010589963887335688716789999


Q ss_pred             HHHCCCCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHHC
Q ss_conf             983662235689643343025---678998759999997300
Q gi|254780941|r  183 CSTLPLAPWVYSADQISDLPM---FHFTAEITREKLFLHLHK  221 (311)
Q Consensus       183 ~~~lpe~~~~y~~~~~Td~~~---~~~i~EiIREki~~~l~~  221 (311)
T Consensus       264 ~eH~~---~l~~~G~~~~~Rr~r~~~~~~~~~~~~V~~~V~a  302 (333)
T TIGR00750       264 EEHKK---FLTESGLLEEKRRERSVEELKKLVEEEVLKKVKA  302 (333)
T ss_pred             HHHHH---HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999---9986360679999999999999999999987642