HHsearch alignment for GI: 254780941 and conserved domain: TIGR03596
>TIGR03596 GTPase_YlqF ribosome biogenesis GTP-binding protein YlqF. Members of this protein family are GTP-binding proteins involved in ribosome biogenesis, including the essential YlqF protein of Bacillus subtilis, which is an essential protein. They are related to Era, EngA, and other GTPases of ribosome biogenesis, but are circularly permuted. This family is not universal, and is not present in Escherichia coli, and so is not as well studied as some other GTPases. This model is built for bacterial members.
Probab=99.58 E-value=3.6e-15 Score=117.98 Aligned_cols=62 Identities=39% Similarity=0.508 Sum_probs=50.4
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHC
Q ss_conf 51218998338998688999998689202105888860212789997399489999879840101
Q gi|254780941|r 20 SRSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAK 84 (311)
Q Consensus 20 ~ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~ 84 (311)
T Consensus 116 ~~~i~v~vVG~PNVGKSSlIN~L~~~k~~~v~~~PG~Tr~~q-~i~l~~--~i~llDtPGvl~P~ 177 (276)
T TIGR03596 116 NRPIRAMIVGIPNVGKSTLINRLAGKKVAKVGNRPGVTKGQQ-WIKLSD--GLELLDTPGILWPK 177 (276)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEE-EEEECC--CEEEECCCCCCCCC
T ss_conf 786389997279875899999873672587779654210258-999579--77996688745788