HHsearch alignment for GI: 254780941 and conserved domain: cd01854

>cd01854 YjeQ_engC YjeQ/EngC. YjeQ (YloQ in Bacillus subtilis) represents a protein family whose members are broadly conserved in bacteria and have been shown to be essential to the growth of E. coli and B. subtilis. Proteins of the YjeQ family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases. All YjeQ family proteins display a unique domain architecture, which includes an N-terminal OB-fold RNA-binding domain, the central permuted GTPase domain, and a zinc knuckle-like C-terminal cysteine domain. This domain architecture suggests a role for YjeQ as a regulator of translation.
Probab=97.91  E-value=1.1e-05  Score=56.61  Aligned_cols=56  Identities=29%  Similarity=0.345  Sum_probs=40.0

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCE---EEECCC----CCCEEEEEEEEEEECCEEEEEEECCCCHH
Q ss_conf             899833899868899999868920---210588----88602127899973994899998798401
Q gi|254780941|r   24 CVALVGATNAGKSTLVNRFVGAKV---SIVTHK----VQTTRSIVRGIVSEKESQIVFLDTPGIFN   82 (311)
Q Consensus        24 ~VaivG~pN~GKSTL~N~l~g~~v---sivS~k----~~TTr~~i~gi~~~~~~qiifvDTPG~~~   82 (311)
T Consensus       163 ~~v~~G~SGvGKSSLiN~L~~~~~~~t~~vs~~~~rGrHTTt~~~L~~l~~gg---~iiDTPG~r~  225 (287)
T cd01854         163 TSVLVGQSGVGKSTLINALLPDLDLATGEISEKLGRGRHTTTHRELFPLPGGG---LLIDTPGFRE  225 (287)
T ss_pred             EEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCC---EEEECCCCCC
T ss_conf             89998899888899998746212125666677608985014157999928995---8986898763