HHsearch alignment for GI: 254780941 and conserved domain: cd01900

>cd01900 YchF YchF subfamily. YchF is a member of the Obg family, which includes four other subfamilies of GTPases: Obg, DRG, Ygr210, and NOG1. Obg is an essential gene that is involved in DNA replication in C. crescentus and Streptomyces griseus and is associated with the ribosome. Several members of the family, including YchF, possess the TGS domain related to the RNA-binding proteins. Experimental data and genomic analysis suggest that YchF may be part of a nucleoprotein complex and may function as a GTP-dependent translational factor.
Probab=99.61  E-value=1.9e-15  Score=119.74  Aligned_cols=87  Identities=26%  Similarity=0.308  Sum_probs=71.6

Q ss_pred             EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCE-----------------EEEEEECCCCHHHCCCC
Q ss_conf             9983389986889999986892021058888602127899973994-----------------89999879840101235
Q gi|254780941|r   25 VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKES-----------------QIVFLDTPGIFNAKDSY   87 (311)
Q Consensus        25 VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~-----------------qiifvDTPG~~~~~~~l   87 (311)
T Consensus         1 ~GivGlpnvGKstlFnalT~~~~-~~~nypf~ti~pn~g~v~VpD~Rl~~L~~~~~p~k~i~a~vefvDIaGLvkgAs~-   78 (274)
T cd01900           1 IGIVGLPNVGKSTLFNALTKAGA-EAANYPFCTIEPNVGIVPVPDERLDKLAEIVKPKKIVPATIEFVDIAGLVKGASK-   78 (274)
T ss_pred             CCEECCCCCCHHHHHHHHHCCCC-CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCC-
T ss_conf             95647899988999999977998-7458997772680589967756588998731776512357899854655677523-


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf             75321002345555321001100001
Q gi|254780941|r   88 HKLMIRLSWSTIKHADIVCLVVDSHR  113 (311)
Q Consensus        88 ~~~~~~~~~~~l~~aDiil~VvDa~~  113 (311)
T Consensus        79 GeGLGN~FL~~Ir~vDai~hVVR~F~  104 (274)
T cd01900          79 GEGLGNKFLSHIREVDAIAHVVRCFE  104 (274)
T ss_pred             CCCCCHHHHHHHHHCCEEEEEHHHCC
T ss_conf             67650899999873463465321115