HHsearch alignment for GI: 254780941 and conserved domain: cd04122
>cd04122 Rab14 Rab14 subfamily. Rab14 GTPases are localized to biosynthetic compartments, including the rough ER, the Golgi complex, and the trans-Golgi network, and to endosomal compartments, including early endosomal vacuoles and associated vesicles. Rab14 is believed to function in both the biosynthetic and recycling pathways between the Golgi and endosomal compartments. Rab14 has also been identified on GLUT4 vesicles, and has been suggested to help regulate GLUT4 translocation. In addition, Rab14 is believed to play a role in the regulation of phagocytosis. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GT
Probab=99.63 E-value=1.5e-15 Score=120.49 Aligned_cols=154 Identities=19% Similarity=0.187 Sum_probs=98.6
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEE-EEEEEEEEEC--CEEEEEEECCCCHHHCCCCCCCCCCHHHHHHH
Q ss_conf 89983389986889999986892021058888602-1278999739--94899998798401012357532100234555
Q gi|254780941|r 24 CVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTR-SIVRGIVSEK--ESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIK 100 (311)
Q Consensus 24 ~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr-~~i~gi~~~~--~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~ 100 (311)
T Consensus 4 KivlvGd~~VGKTsli~r~~~~~f~~--~~~~Tig~~~~~k~i~~~~~~~~l~iwDtaG~e--------~~~~~~~~~~~ 73 (166)
T cd04122 4 KYIIIGDMGVGKSCLLHQFTEKKFMA--DCPHTIGVEFGTRIIEVNGQKIKLQIWDTAGQE--------RFRAVTRSYYR 73 (166)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC--CCCCCCCEEEEEEEEEECCEEEEEEEEECCCCC--------CCCCCCHHHEE
T ss_conf 99999999957999999991298899--999974468899999999999999999899985--------44425211143
Q ss_pred HHHHHCCCCHHHHHHHCC-HHHHHHHHH---HCCCCCEEEEEECCCHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf 532100110000100000-001223454---428720257872110104345-788886410012334311000138742
Q gi|254780941|r 101 HADIVCLVVDSHRELKVN-IHDLLKEIA---KRSSRLILILNKIDCVKPERL-LEQAEIANKLVFIEKTFMVSATKGHGC 175 (311)
Q Consensus 101 ~aDiil~VvDa~~~~~~~-~~~il~~l~---~~~~p~IiVlNKiDlv~~~~l-~~~~~~~~~~~~~~~i~~ISAk~g~Gi 175 (311)
T Consensus 74 ~a~~~ilvydvt~~~Sf~~l~~w~~~~~~~~~~~~~iilVGNK~DL~~~r~V~~~e~~~~a~~~~~-~~~E~SAk~g~nV 152 (166)
T cd04122 74 GAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKADLEAQRDVTYEEAKQFADENGL-LFLECSAKTGENV 152 (166)
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCHHHHHHHHHHCCC-EEEEECCCCCCCH
T ss_conf 154659972587476799999999999985699975870340157444389999999999998699-8999865878088
Q ss_pred HHHHHHHHHHCCC
Q ss_conf 6789999983662
Q gi|254780941|r 176 DDVLNYLCSTLPL 188 (311)
Q Consensus 176 d~L~~~L~~~lpe 188 (311)
T Consensus 153 ~e~F~~l~~~i~~ 165 (166)
T cd04122 153 EDAFLETAKKIYQ 165 (166)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999974