HHsearch alignment for GI: 254780941 and conserved domain: pfam01926
>pfam01926 MMR_HSR1 GTPase of unknown function.
Probab=99.87 E-value=1.3e-22 Score=166.16 Aligned_cols=106 Identities=33% Similarity=0.436 Sum_probs=97.3
Q ss_pred CHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf 68899999868920210588886021278999739948999987984010123575321002345555321001100001
Q gi|254780941|r 34 GKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHR 113 (311)
Q Consensus 34 GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~ 113 (311)
T Consensus 1 GKSsLiN~L~~~~~~~v~~~~gtT~~~~~~~~~~~~~~i~liDTPGi~~~~~~~~~~~~~~~~~~~~~~d~il~viD~~~ 80 (106)
T pfam01926 1 GKSTLINALTGKKRAIVSDYPGTTRDPNEGRVELDGKQIILVDTPGIIEGASKGEGELGNRTLEAIEEADLILHVVDASE 80 (106)
T ss_pred CHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf 91279999978885555288998846355899889988999837873226504678889999972345737999999999
Q ss_pred HHHCCHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 00000001223454428720257872
Q gi|254780941|r 114 ELKVNIHDLLKEIAKRSSRLILILNK 139 (311)
Q Consensus 114 ~~~~~~~~il~~l~~~~~p~IiVlNK 139 (311)
T Consensus 81 ~~~~~d~~~~~~l~~~~~p~iiv~NK 106 (106)
T pfam01926 81 GLTEEDLEILDLLLELGKPVILVLNK 106 (106)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 99989999999999869988999939