HHsearch alignment for GI: 254780941 and conserved domain: pfam03308
>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=99.38 E-value=7.5e-12 Score=96.54 Aligned_cols=188 Identities=18% Similarity=0.224 Sum_probs=106.2
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHH------CCCEEEE--CCCCCCEEEEEEEE---------------E-------
Q ss_conf 4368512189983389986889999986------8920210--58888602127899---------------9-------
Q gi|254780941|r 16 VQDNSRSGCVALVGATNAGKSTLVNRFV------GAKVSIV--THKVQTTRSIVRGI---------------V------- 65 (311)
Q Consensus 16 ~~~~~ksg~VaivG~pN~GKSTL~N~l~------g~~vsiv--S~k~~TTr~~i~gi---------------~------- 65 (311)
T Consensus 23 ~~~~g~a~~iGiTG~PGaGKStli~~l~~~~~~~g~~vaVlAvDPSS~~sgGaiLGDr~RM~~~~~~~~vfiRs~~srg~ 102 (267)
T pfam03308 23 MPLTGRAHRVGITGVPGAGKSTLIEALGMELRRRGHRVAVLAVDPSSPFTGGSILGDRTRMQRLAVDPGAFIRSSPSRGA 102 (267)
T ss_pred HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 74359955998768998879999999999999689868999978999888863001077776505899858864577888
Q ss_pred ---------------EECCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCC
Q ss_conf ---------------73994899998798401012357532100234555532100110000100000001223454428
Q gi|254780941|r 66 ---------------SEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRS 130 (311)
Q Consensus 66 ---------------~~~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~ 130 (311)
T Consensus 103 lGGls~~t~~~i~lleaaGfD~IivETVGVGQsE-----------~~v~~~aD~~llv~~Pg~--GDe-iQ~iK-aGImE 167 (267)
T pfam03308 103 LGGLSRATREAILLLDAAGFDVIIIETVGVGQSE-----------VDIANMADTFVLVTIPGG--GDD-LQGIK-AGLME 167 (267)
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC-----------HHHHHHCCEEEEEECCCC--CHH-HHHHH-HHHHH
T ss_conf 8871476999999999779999999247777530-----------355541576899955887--608-88987-53765
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHCC-----CC-CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC---C
Q ss_conf 72025787211010434578888641001-----23-343110001387426789999983662235689643343---0
Q gi|254780941|r 131 SRLILILNKIDCVKPERLLEQAEIANKLV-----FI-EKTFMVSATKGHGCDDVLNYLCSTLPLAPWVYSADQISD---L 201 (311)
Q Consensus 131 ~p~IiVlNKiDlv~~~~l~~~~~~~~~~~-----~~-~~i~~ISAk~g~Gid~L~~~L~~~lpe~~~~y~~~~~Td---~ 201 (311)
T Consensus 168 iaDi~vVNKaD~~~A~~~~~~l~~~l~l~~~~~~~W~p~Vl~tSA~~g~Gi~el~~~I~~~~~---~l~~sG~l~~rR~~ 244 (267)
T pfam03308 168 IADIYVVNKADLPGAERTARELRSALHLLTPKEAGWRPPVLTTSAVTGEGIDELWDAIEEHRE---FLTATGLLAARRRA 244 (267)
T ss_pred HCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH---HHHHCCHHHHHHHH
T ss_conf 354899966764769999999999985179877899999899874788999999999999999---99978869999999
Q ss_pred HHHHHHHHHHHHHHHHHHHC
Q ss_conf 25678998759999997300
Q gi|254780941|r 202 PMFHFTAEITREKLFLHLHK 221 (311)
Q Consensus 202 ~~~~~i~EiIREki~~~l~~ 221 (311)
T Consensus 245 q~~~w~~~~I~~~Ll~~l~~ 264 (267)
T pfam03308 245 RIEEWLKTLVEDDLLKRVKA 264 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999974