HHsearch alignment for GI: 254780941 and conserved domain: smart00173
>smart00173 RAS Ras subfamily of RAS small GTPases. Similar in fold and function to the bacterial EF-Tu GTPase. p21Ras couples receptor Tyr kinases and G protein receptors to protein kinase cascades
Probab=99.65 E-value=2.1e-15 Score=119.47 Aligned_cols=152 Identities=17% Similarity=0.179 Sum_probs=98.4
Q ss_pred EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECC--EEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 998338998688999998689202105888860212789997399--489999879840101235753210023455553
Q gi|254780941|r 25 VALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKE--SQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHA 102 (311)
Q Consensus 25 VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~--~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~a 102 (311)
T Consensus 3 iv~vGd~~vGKTsli~r~~~~~f~--~~y~~Ti~~~~~k~i~~~~~~~~l~iwDt~G~e~--------~~~~~~~~~~~a 72 (164)
T smart00173 3 LVVLGSGGVGKSALTIQFVQGHFV--DDYDPTIEDSYRKQIEIDGEVCLLDILDTAGQEE--------FSAMRDQYMRTG 72 (164)
T ss_pred EEEECCCCCCHHHHHHHHHHCCCC--CCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCC--------HHHHHHHHCCCC
T ss_conf 999999997899999999729799--8778813678999999999999999998999710--------356777753798
Q ss_pred HHHCCCCHHHHHHHCC-HHHHHHHHH----HCCCCCEEEEEECCCHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCHH
Q ss_conf 2100110000100000-001223454----428720257872110104345-7888864100123343110001387426
Q gi|254780941|r 103 DIVCLVVDSHRELKVN-IHDLLKEIA----KRSSRLILILNKIDCVKPERL-LEQAEIANKLVFIEKTFMVSATKGHGCD 176 (311)
Q Consensus 103 Diil~VvDa~~~~~~~-~~~il~~l~----~~~~p~IiVlNKiDlv~~~~l-~~~~~~~~~~~~~~~i~~ISAk~g~Gid 176 (311)
T Consensus 73 ~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~piilvgnK~DL~~~r~V~~~e~~~~a~~~~~-~~~E~SAk~g~nV~ 151 (164)
T smart00173 73 EGFLLVYSITDRQSFEEIKKFREQILRVKDRDDVPIVLVGNKCDLESERVVSTEEGKELARQWGC-PFLETSAKERVNVD 151 (164)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHCCC-EEEEECCCCCCCHH
T ss_conf 77999830798899999999999999861888886687775346301178999999999998399-89998589881789
Q ss_pred HHHHHHHHHCC
Q ss_conf 78999998366
Q gi|254780941|r 177 DVLNYLCSTLP 187 (311)
Q Consensus 177 ~L~~~L~~~lp 187 (311)
T Consensus 152 ~~F~~l~~~i~ 162 (164)
T smart00173 152 EAFYDLVREIR 162 (164)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999996