RPSBLAST alignment for GI: 254780941 and conserved domain: KOG0468

>gnl|CDD|35689 KOG0468, KOG0468, KOG0468, U5 snRNP-specific protein [Translation, ribosomal structure and biogenesis]. Length = 971
 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 30/178 (16%)

Query: 3   MGEITFFNEHKDFVQDNS-RSGCVALVGATNAGKSTLVNRFVGAKVS------------I 49
           + E  +  E+   + DN  R   V LVG  + GK+ L++  V                  
Sbjct: 108 VPETVYDLEYLAGLMDNPERIRNVGLVGHLHHGKTALMDLLVEQTHPDFSKNTEADLRYT 167

Query: 50  VTHKVQTTR---------SIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIK 100
            T   +  R         ++V      K   +  LDTPG  N  D            +++
Sbjct: 168 DTLFYEQERGCSIKSTPVTLVLSDSKGKSYLMNILDTPGHVNFSDE----TTA----SLR 219

Query: 101 HADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKPERLLEQAEIANKL 158
            +D V LVVD    + +N   ++K   +    +++++NK+D +  E  L   +   KL
Sbjct: 220 LSDGVVLVVDVAEGVMLNTERIIKHAIQNRLPIVVVINKVDRLILELKLPPMDAYYKL 277