RPSBLAST alignment for GI: 254780941 and conserved domain: KOG0468
>gnl|CDD|35689 KOG0468, KOG0468, KOG0468, U5 snRNP-specific protein [Translation, ribosomal structure and biogenesis]. Length = 971
Score = 42.3 bits (99), Expect = 2e-04
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 30/178 (16%)
Query: 3 MGEITFFNEHKDFVQDNS-RSGCVALVGATNAGKSTLVNRFVGAKVS------------I 49
+ E + E+ + DN R V LVG + GK+ L++ V
Sbjct: 108 VPETVYDLEYLAGLMDNPERIRNVGLVGHLHHGKTALMDLLVEQTHPDFSKNTEADLRYT 167
Query: 50 VTHKVQTTR---------SIVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIK 100
T + R ++V K + LDTPG N D +++
Sbjct: 168 DTLFYEQERGCSIKSTPVTLVLSDSKGKSYLMNILDTPGHVNFSDE----TTA----SLR 219
Query: 101 HADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVKPERLLEQAEIANKL 158
+D V LVVD + +N ++K + +++++NK+D + E L + KL
Sbjct: 220 LSDGVVLVVDVAEGVMLNTERIIKHAIQNRLPIVVVINKVDRLILELKLPPMDAYYKL 277