HHsearch alignment for GI: 254780942 and conserved domain: COG1044
>COG1044 LpxD UDP-3-O-[3-hydroxymyristoyl].
Probab=99.88 E-value=2.1e-22 Score=145.99 Aligned_cols=160 Identities=26% Similarity=0.332 Sum_probs=87.0
Q ss_pred EEEEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEC-CC
Q ss_conf 7994112331784100122322344200021116313433-212111210021344320000025864432023102-11
Q gi|254780942|r 262 VFLSHDTIIQPDTVIEPHVFFGCGVSIENYVQIRAFSYLE-GVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKK-AT 339 (442)
Q Consensus 262 ~~i~~~~~I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~-~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~-s~ 339 (442)
T Consensus 106 A~i~p~A~i~~~~~ig~~vvI~~~v~IG~~~~I~~~avIg~~~~IG~~~~i~~~v~I~~~~~IG~~v~I~~GavIG~dgF 185 (338)
T COG1044 106 AVIDPTATIGKNVSIGPNVVIGAGVVIGENVVIGAGAVIGENVKIGDGTVIHPNVTIYHNVVIGNNVIIHSGAVIGADGF 185 (338)
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEECCCEECCCEEECCCCEECCCCC
T ss_conf 53177670377873288749888978789858988978888968888858847878952757878228889988756852
Q ss_pred CCCC-----CCCCCCCCCCCCEECCCCEECCCEEECC--CCC------C-CCCCCEECCCCEECCCCEEEC------CEE
Q ss_conf 2478-----5448745556639889989979808834--457------7-545629878879886998937------839
Q gi|254780942|r 340 IKEG-----SKINHLSYVGDSVVGKNVNIGAGTITCN--YDG------T-HKYKTHINENAFIGSNSSLIA------PIT 399 (442)
Q Consensus 340 i~~g-----~~i~~~~~igd~~iG~~~~ig~g~i~~n--~~g------~-~~~~~~ig~~~~iG~~~~i~~------gv~ 399 (442)
T Consensus 186 g~a~~~~g~~Ki~q---~g~V~Igd~VeIGanT~Idrga~~dTvIg~~~kIdN~vqIaHnv~IG~~~~I~~~vgIaGs~~ 262 (338)
T COG1044 186 GYAGTAIGWVKIPQ---IGRVIIGDDVEIGANTTIDRGALDDTVIGEGVKIDNLVQIGHNVRIGEHCIIAGQVGIAGSVK 262 (338)
T ss_pred CCCCCCCCCEECCE---ECEEEECCCEEECCCCEECCCCCCCCEECCCCEECCEEEECCCCEECCCCEEECCCEEECCCE
T ss_conf 12246688567126---065997982487355242565556726537848764307815527888837702631613535
Q ss_pred ECCCCEECCCCEECCCC--CCCCEEEE
Q ss_conf 88998997783576643--69868981
Q gi|254780942|r 400 IGQGTYVASGSIITQDT--PENSLVFA 424 (442)
Q Consensus 400 ig~~~~i~ag~~v~~dv--~~~~~v~~ 424 (442)
T Consensus 263 IG~~v~igg~vgI~gh~~IgD~~~I~~ 289 (338)
T COG1044 263 IGKYVIIGGQVGIAGHLEIGDGVTIGA 289 (338)
T ss_pred ECCEEEECCCEEECCCEEECCCCEEEC
T ss_conf 778079876134648418757878804