HHsearch alignment for GI: 254780942 and conserved domain: COG2171
>COG2171 DapD Tetrahydrodipicolinate N-succinyltransferase [Amino acid transport and metabolism].
Probab=99.64 E-value=4.7e-16 Score=109.77 Aligned_cols=118 Identities=28% Similarity=0.393 Sum_probs=81.4
Q ss_pred CCCEECCCCCCCCCCCCEEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 84100122322344200021116313433-21211121002134432000002586443202310211247854487455
Q gi|254780942|r 273 DTVIEPHVFFGCGVSIENYVQIRAFSYLE-GVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIKEGSKINHLSY 351 (442)
Q Consensus 273 ~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~-~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~~g~~i~~~~~ 351 (442)
T Consensus 108 g~RI~p~a~VR~ga~i~~gtvvM~~sfVNigA~~~~gtMVd~~as~G~~------------------------------- 156 (271)
T COG2171 108 GVRIVPGAIVRLGAYIAKGTVVMPESFVNIGAGTGEGTMVDGRASVGSC------------------------------- 156 (271)
T ss_pred CEEECCCCEEEECCEECCCCEECCCCEEEECCCCCCCEEEEEEEEEECC-------------------------------
T ss_conf 6363676477605287799387555668777602752589615655131-------------------------------
Q ss_pred CCCCEECCCCEECCCEEECC-CCCCCCCCCEECCCCEECCCCEEECCEEECCCCEECCCCEECCCCCCCCEEEE
Q ss_conf 56639889989979808834-45775456298788798869989378398899899778357664369868981
Q gi|254780942|r 352 VGDSVVGKNVNIGAGTITCN-YDGTHKYKTHINENAFIGSNSSLIAPITIGQGTYVASGSIITQDTPENSLVFA 424 (442)
Q Consensus 352 igd~~iG~~~~ig~g~i~~n-~~g~~~~~~~ig~~~~iG~~~~i~~gv~ig~~~~i~ag~~v~~dv~~~~~v~~ 424 (442)
T Consensus 157 ---a~VGkn~higgGa~I~GVLep~~a~Pv~IgdncliGAns~~veGV~vGdg~VV~aGv~I~~~tki~~~~~g 227 (271)
T COG2171 157 ---AQVGKNSHIGGGASIGGVLEPLQANPVIIGDNCLIGANSEVVEGVIVGDGCVVAAGVFITQDTKIYDRVAG 227 (271)
T ss_pred ---EEECCCCCCCCCCEEEEEECCCCCCCEEECCCCEECCCCCEEEEEEECCCCEEECCEEEECCCCEEEEECC
T ss_conf ---79799845278636767734888788698776186245334861696789688545089379514774346