HHsearch alignment for GI: 254780942 and conserved domain: COG2266

Probab=99.66  E-value=5.2e-16  Score=109.54  Aligned_cols=111  Identities=21%  Similarity=0.396  Sum_probs=89.9

Q ss_pred             CEEEEECCCCCCCCC-CCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCH
Q ss_conf             089994588772327-8887441258848579999999997799779999579889999973026972899985998861
Q gi|254780942|r    5 RLAIVLAAGRGHRMK-SSSSKVLQKIAGKPMISHVMETIAAAGIENVALVLGYGAEEITRINFPPTLSVEYYIQDCQQGT   83 (442)
Q Consensus         5 ~~AiILAaG~GtRl~-p~~pKpLlpi~gkpli~~~i~~l~~~g~~~ivvv~~~~~e~i~~~~~~~~~~i~~v~q~~~~GT   83 (442)
T Consensus         1 m~~iiMAGGrGtRmg~~E--KPlleV~GkpLI~~v~~al~~-~~d~i~v~isp~tp~t~~~~~~~gv~v--i~-tpG~GY   74 (177)
T COG2266           1 MMAIIMAGGRGTRMGRPE--KPLLEVCGKPLIDRVLEALRK-IVDEIIVAISPHTPKTKEYLESVGVKV--IE-TPGEGY   74 (177)
T ss_pred             CCEEEECCCCCCCCCCCC--CCCHHHCCCCHHHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHCCCEE--EE-CCCCCH
T ss_conf             935896288544468876--752020781389999999972-218389996799876999997359369--97-599870


Q ss_pred             HHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             44664100001234460589851541115332200000013
Q gi|254780942|r   84 AHAVLTAQDAIKPGYDDVIIMYGDVPLVSSHTLKKAMDKIA  124 (442)
Q Consensus        84 a~Ai~~a~~~l~~~~~~~lVl~GD~~li~~~~l~~l~~~~~  124 (442)
T Consensus        75 v~Dl~~al~~l~---~P~lvvsaDLp~l~~~~i~~vi~~~~  112 (177)
T COG2266          75 VEDLRFALESLG---TPILVVSADLPFLNPSIIDSVIDAAA  112 (177)
T ss_pred             HHHHHHHHHHCC---CCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf             899999997449---94599865534178899999999985