HHsearch alignment for GI: 254780942 and conserved domain: PRK13368
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional.
Probab=99.84 E-value=3.4e-20 Score=133.36 Aligned_cols=224 Identities=21% Similarity=0.246 Sum_probs=152.7
Q ss_pred CCEEEEECCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHC-CCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 408999458877232788874412588485799999999977-9977999957988999997302697289998599886
Q gi|254780942|r 4 KRLAIVLAAGRGHRMKSSSSKVLQKIAGKPMISHVMETIAAA-GIENVALVLGYGAEEITRINFPPTLSVEYYIQDCQQG 82 (442)
Q Consensus 4 ~~~AiILAaG~GtRl~p~~pKpLlpi~gkpli~~~i~~l~~~-g~~~ivvv~~~~~e~i~~~~~~~~~~i~~v~q~~~~G 82 (442)
T Consensus 2 k~~~iIPAR~~S~R~-p~--K~L~~i~g~pmi~~v~~~a~~s~~~d~v~VaT--dd~eI~~~~k~~g~~~i~ts~~~~~G 76 (238)
T PRK13368 2 KVVVVIPARYGSSRL-PG--KPLLDILGKPMIQHVYERAAQAAGVEEVYVAT--DDQRIEDAVEAFGGKVVMTSDDHLSG 76 (238)
T ss_pred CEEEEECCCCCCCCC-CC--CCCHHHCCCCHHHHHHHHHHHCCCCCEEEEEC--CCHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 789998468778789-98--70125289699999999998468988299956--84248777500463278515655771
Q ss_pred HHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC--CCCEEEEC------CCCCCCCEEEECCCCCEE
Q ss_conf 1446641000012344605898515411153322000000135861--00100101------221574404202333100
Q gi|254780942|r 83 TAHAVLTAQDAIKPGYDDVIIMYGDVPLVSSHTLKKAMDKIAQGYS--IAVVGFNA------DNPKGYGRLLIKNNEIIA 154 (442)
Q Consensus 83 Ta~Ai~~a~~~l~~~~~~~lVl~GD~~li~~~~l~~l~~~~~~~~~--~~i~~~~~------~dp~~yGvV~~d~~~v~~ 154 (442)
T Consensus 77 T-dRi~Ea~~~~~--~d~ivnvQgDePli~p~~I~~~i~~~~~~~~~~v~t~~~~~~~~~~~~n~n~vKvv~~~~~~~ly 153 (238)
T PRK13368 77 T-DRLAEVMLKIE--ADIYINVQGDEPLIRPRDIDTLIQPMLDDPSINVATLCAPISTEEEFESPNVVKVVVDKNGDALY 153 (238)
T ss_pred H-HHHHHHHHHCC--CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCCCC
T ss_conf 4-78999985159--87899953886778999999999999837765276787416888884389852999899787011
Q ss_pred CCCCCCCCCC--CCCCCCCCCCHHEECCHHHHHHHHHCCCCCCCCHHHHHHHHHH--HHHHHCCEEEEEECHHHEECCCC
Q ss_conf 1001466754--2100035560011125014677753288874001112114899--99730771799917214301112
Q gi|254780942|r 155 IREENDATDE--ERKIHYCNSGLMAIDGLYIMDWLLQIKKNKVSQEYYLTDIIEK--ARLDGKSIASIDVKEQEVCGCNN 230 (442)
Q Consensus 155 i~Ek~d~~~~--~~~~~lin~GiY~f~~~~L~~~l~~l~~~~~~gE~yltDii~~--l~~~g~~i~~~~~~~~~~~gv~~ 230 (442)
T Consensus 154 fSR~~ip~~~~~~~~~~~khiGiy~f~~~~L~~f~~-l~~s~l----E~~E~lEqLR~leng~~I~~~~~~~~-~~~VDt 227 (238)
T PRK13368 154 FSRSPIPSRRDGESARYLKHVGIYAFRRDVLQQFSQ-LPETPL----EQIESLEQLRALEHGYKIRMVEVEAT-SIGVDT 227 (238)
T ss_pred CCCCCCCCCCCCCCCHHHEEEEEEEECHHHHHHHHH-CCCCHH----HHHHHHHHHHHHHCCCCEEEEEECCC-CCCCCC
T ss_conf 452567511245420122030112211999999870-899856----77770899999986992679995999-999879
Q ss_pred CCCCCCCCCCC
Q ss_conf 10000001222
Q gi|254780942|r 231 RYELSLIENIW 241 (442)
Q Consensus 231 ~~~L~~~~~~~ 241 (442)
T Consensus 228 ~eDl~~v~kim 238 (238)
T PRK13368 228 PEDLERVRAIM 238 (238)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999859