HHsearch alignment for GI: 254780942 and conserved domain: PRK13627

>PRK13627 carnitine operon protein CaiE; Provisional.
Probab=99.87  E-value=5.8e-22  Score=143.44  Aligned_cols=72  Identities=28%  Similarity=0.451  Sum_probs=64.8

Q ss_pred             CCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEEECCEEECCCCEECCCCEECCC--CCCCCEEEECCCEEEE
Q ss_conf             63988998997980883445775456298788798869989378398899899778357664--3698689813560770
Q gi|254780942|r  354 DSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAPITIGQGTYVASGSIITQD--TPENSLVFARSRQIVK  431 (442)
Q Consensus       354 d~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~~gv~ig~~~~i~ag~~v~~d--v~~~~~v~~~~~~~~~  431 (442)
T Consensus        71 ~~~IG~~vtIGH~ail--------hgc~Igd~~lIGmgavVldga~Ig~~~iI~AgslV~~g~~ip~~~L~~G~PAk~vR  142 (196)
T PRK13627         71 DTIVGENGHIGHGAIL--------HGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEKRQLLMGTPARAVR  142 (196)
T ss_pred             CCEECCCEEECCCEEE--------EEEEEECCCEECCCCEEECCCEECCCCEECCCCEECCCCCCCCCCEEEECCEEEEE
T ss_conf             8588898058787299--------63499489788469799288899999899768645799493898199877816811


Q ss_pred             CC
Q ss_conf             77
Q gi|254780942|r  432 ED  433 (442)
Q Consensus       432 ~~  433 (442)
T Consensus       143 ~l  144 (196)
T PRK13627        143 SV  144 (196)
T ss_pred             CC
T ss_conf             49