HHsearch alignment for GI: 254780942 and conserved domain: PRK13627

>PRK13627 carnitine operon protein CaiE; Provisional.
Probab=99.64  E-value=1e-15  Score=107.88  Aligned_cols=136  Identities=14%  Similarity=0.233  Sum_probs=85.5

Q ss_pred             EEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCC
Q ss_conf             94112331784100122322344200021116313433212111210021344320000025864432023102112478
Q gi|254780942|r  264 LSHDTIIQPDTVIEPHVFFGCGVSIENYVQIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIKEG  343 (442)
Q Consensus       264 i~~~~~I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~~g  343 (442)
T Consensus        13 i~~~afIap~A~viGdV~ig~~~sIw~~aVlRGD~--~~I~IG~~tNIQD~~------viH~~~--~-----~~~~IG~~   77 (196)
T PRK13627         13 VHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDY--GRLIVQAGANLQDGC------IMHGYC--D-----TDTIVGEN   77 (196)
T ss_pred             CCCCEEECCCCEEEEEEEECCCCEECCCEEEECCC--CCEEECCCCEECCCC------EEECCC--C-----CCCEECCC
T ss_conf             29983889999899849999998897770895688--717989986767983------781489--9-----98588898


Q ss_pred             CCCCCCCCCCCCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEEECCEEECCCCEEC-CCCEECCCCCCCCE
Q ss_conf             5448745556639889989979808834457754562987887988699893783988998997-78357664369868
Q gi|254780942|r  344 SKINHLSYVGDSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAPITIGQGTYVA-SGSIITQDTPENSL  421 (442)
Q Consensus       344 ~~i~~~~~igd~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~~gv~ig~~~~i~-ag~~v~~dv~~~~~  421 (442)
T Consensus        78 vtIGH~ailhgc~Igd~~lIGmgavVld-------ga~Ig~~~iI~AgslV~~g~~ip~~~L~~G~PAk~vR~lt~~ei  149 (196)
T PRK13627         78 GHIGHGAILHGCVIGRDALVGMNSVIMD-------GAVIGEESIVAAMSFVKAGFQGEKRQLLMGTPARAVRSVSDQEL  149 (196)
T ss_pred             EEECCCEEEEEEEEECCCEECCCCEEEC-------CCEECCCCEECCCCEECCCCCCCCCCEEEECCEEEEECCCHHHH
T ss_conf             0587872996349948978846979928-------88999998997686457994938981998778168114999999