HHsearch alignment for GI: 254780942 and conserved domain: TIGR01172
>TIGR01172 cysE serine O-acetyltransferase; InterPro: IPR005881 The biosynthesis of L-cysteine is the predominant way by which inorganic sulphur is incorporated into organic compounds. In this process, the most abundant utilizable source of sulphur, inorganic sulphate, is taken up and reduced to sulphide. Sulphide is used to produce L-cysteine, which serves for protein synthesis or the production of other sulphur-containing organic compounds. Two routes for cysteine biosynthesis in nature have been documented. Serine transacetylase (2.3.1.30 from EC) catalyzes steps in pathway I, the activation of L-serine by acetyl-coenzyme A, yielding O-acetyl-L-serine.; GO: 0009001 serine O-acetyltransferase activity, 0006535 cysteine biosynthetic process from serine, 0005737 cytoplasm.
Probab=98.51 E-value=1.4e-07 Score=61.60 Aligned_cols=93 Identities=32% Similarity=0.437 Sum_probs=50.9
Q ss_pred ECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 31784100122322344200021116313433212111210021344320000025864432023102112478544874
Q gi|254780942|r 270 IQPDTVIEPHVFFGCGVSIENYVQIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIKEGSKINHL 349 (442)
Q Consensus 270 I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~~g~~i~~~ 349 (442)
T Consensus 58 ~~tgidIHPgA~IG~g~fIDH------g---~GvVIGETa~iGddv~iyhGVTLGGtgk~------------~G~kR-H- 114 (163)
T TIGR01172 58 VLTGIDIHPGARIGRGVFIDH------G---TGVVIGETAEIGDDVTIYHGVTLGGTGKE------------KGVKR-H- 114 (163)
T ss_pred HHCCCCCCCCCCCCCEEEEEC------C---CCEEEEEEEEECCCEEEEECEEECCCCCC------------CCCCC-C-
T ss_conf 530232176430077307775------6---03685003687388378632120678888------------78898-8-
Q ss_pred CCCCCCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEEECC
Q ss_conf 555663988998997980883445775456298788798869989378
Q gi|254780942|r 350 SYVGDSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAP 397 (442)
Q Consensus 350 ~~igd~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~~g 397 (442)
T Consensus 115 -----Pt~~~gV~iGAGAKvLG-------~I~vG~~AkiGAnsVVl~d 150 (163)
T TIGR01172 115 -----PTIGEGVVIGAGAKVLG-------NIEVGENAKIGANSVVLKD 150 (163)
T ss_pred -----CCCCCCEEEEECCEEEC-------CEEECCCCEECCCEEECCC
T ss_conf -----82568717840782403-------7667799777233267353