HHsearch alignment for GI: 254780942 and conserved domain: TIGR01852
>TIGR01852 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; InterPro: IPR010137 This entry describes LpxA, an enzyme for the biosynthesis of lipid A, a component of lipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat.; GO: 0008780 acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, 0008610 lipid biosynthetic process.
Probab=99.77 E-value=6.4e-19 Score=126.11 Aligned_cols=53 Identities=13% Similarity=0.220 Sum_probs=23.0
Q ss_pred CEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEEECCEEECCCCEECCCCEECC
Q ss_conf 398899899798088344577545629878879886998937839889989977835766
Q gi|254780942|r 355 SVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAPITIGQGTYVASGSIITQ 414 (442)
Q Consensus 355 ~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~~gv~ig~~~~i~ag~~v~~ 414 (442)
T Consensus 102 T~iG~~nllMAysHvA-------HDC~vGn~vv~aN~a~LAGHV~vgD~a~iGG~~avHQ 154 (257)
T TIGR01852 102 TSIGNNNLLMAYSHVA-------HDCVVGNHVVLANNATLAGHVEVGDYAIIGGLVAVHQ 154 (257)
T ss_pred EEECCCCEECCCCEEE-------ECCEECCEEEEECCCEECEEEEECCEEEECCCCCEEE
T ss_conf 9988876572053561-------2436888169813631222799888999778972110