HHsearch alignment for GI: 254780942 and conserved domain: TIGR01853

>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro: IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (2.3.1 from EC) catalyses an early step in lipid A biosynthesis : UDP-3-O-(3-hydroxytetradecanoyl)glucosamine + (R)-3-hydroxytetradecanoyl- [acyl carrier protein] = UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine + [acyl carrier protein] Members of this family also contain a hexapeptide repeat (IPR001451 from INTERPRO). This entry represents the non-repeating region of LPXD proteins.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0009245 lipid A biosynthetic process.
Probab=100.00  E-value=2.1e-33  Score=208.50  Aligned_cols=171  Identities=26%  Similarity=0.313  Sum_probs=140.6

Q ss_pred             CCEEEEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCC-CCCCCCCCCCCCCCCCC--------------------
Q ss_conf             527994112331784100122322344200021116313433-21211121002134432--------------------
Q gi|254780942|r  260 ETVFLSHDTIIQPDTVIEPHVFFGCGVSIENYVQIRAFSYLE-GVHIGKKTIIGPFARIR--------------------  318 (442)
Q Consensus       260 ~~~~i~~~~~I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~-~~~Ig~~~~Ig~~~~i~--------------------  318 (442)
T Consensus       124 pnvvIG~~v~IG~~~~I~pg~~iG~~v~IG~~~~i~~~v~i~~~~~lG~nV~I~~GaVIG~DGFGya~~~~g~~~KI~q~  203 (336)
T TIGR01853       124 PNVVIGAGVEIGENVIIGPGVVIGDDVVIGDGSVIYPNVVIYERVQLGKNVIIHAGAVIGSDGFGYAHTANGGHVKIPQI  203 (336)
T ss_pred             CEEEECCCCEECCCCEECCCCEECCCCEECCCCEEECCCEEEECCEECCEEEECCCCEECCCCCCEEECCCCCEEEEEEE
T ss_conf             54178888687786363577687688687996778067089724156471587688788678732035788971544130


Q ss_pred             CCEEECCCCCCCCEEEEE-----CCCCCCCCCCCCCCCCCCCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCE
Q ss_conf             000002586443202310-----211247854487455566398899899798088344577545629878879886998
Q gi|254780942|r  319 QETTIEKNVRIGNFCEVK-----KATIKEGSKINHLSYVGDSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSS  393 (442)
Q Consensus       319 ~~s~i~~~~~Ig~~~ei~-----~s~i~~g~~i~~~~~igd~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~  393 (442)
T Consensus       204 G~ViI~D~VEIGANTtIDRg~~~dT~i~~gtKIDNL-----VQIAHNc~IG~n~~ivaqvGiaGS-t~iG~~V~~GGqvG  277 (336)
T TIGR01853       204 GRVIIEDDVEIGANTTIDRGAFDDTVIGEGTKIDNL-----VQIAHNCRIGENCIIVAQVGIAGS-TKIGRNVILGGQVG  277 (336)
T ss_pred             CEEEEECEEEECCCCHHHCCCCCCCEEECCCEECCE-----EEEEEEEEECCCCEEEEEEECCEE-EEECCEEEECCEEE
T ss_conf             248960233874687021102147187238466231-----574133462664278964201134-67558069626026


Q ss_pred             EECCEEECCCCEECCCCEECCCCCCCCEEEE--CCCEEEECCCCC
Q ss_conf             9378398899899778357664369868981--356077077422
Q gi|254780942|r  394 LIAPITIGQGTYVASGSIITQDTPENSLVFA--RSRQIVKEDGAL  436 (442)
Q Consensus       394 i~~gv~ig~~~~i~ag~~v~~dv~~~~~v~~--~~~~~~~~~~~~  436 (442)
T Consensus       278 v~GHl~IgD~v~i~A~sgV~~~~~~~~~ygggi~Pa~~~~~w~k~  322 (336)
T TIGR01853       278 VAGHLEIGDNVTIGAKSGVTKSVPPNGRYGGGIIPAMPQKEWLKI  322 (336)
T ss_pred             EECEEEECCCCEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHH
T ss_conf             511089438348845122067779886010011141202478999