HHsearch alignment for GI: 254780942 and conserved domain: TIGR03308
>TIGR03308 phn_thr-fam phosphonate metabolim protein, transferase hexapeptide repeat family. This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein.
Probab=99.48 E-value=1.7e-13 Score=95.23 Aligned_cols=130 Identities=17% Similarity=0.175 Sum_probs=81.8
Q ss_pred EEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 12331784100122322344200021116313433212111210021344320000025864432023102112478544
Q gi|254780942|r 267 DTIIQPDTVIEPHVFFGCGVSIENYVQIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIKEGSKI 346 (442)
Q Consensus 267 ~~~I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~~g~~i 346 (442)
T Consensus 19 ~~~lG~~v~Ig~~~~i~-ns~IGDySyI~~~~~I~n~~IGkfcsIa~~v~I~~~nHp~~~~s~~~f~y~~~~~~~-~~~~ 96 (204)
T TIGR03308 19 ESKLGRYTEIGERTRLR-EVALGDYSYVMRDCDIIYTTIGKFCSIAAMVRINATNHPMERPTLHHFTYRAAMYFD-DASD 96 (204)
T ss_pred CCCCCCCEEECCCCEEE-CCEECCCCEECCCCEEECCEECCCCEECCCCEECCCCCCCCCCEECCEEEECCCCCC-CCCC
T ss_conf 27837833999995883-379999858889975988869998488898798987787667267777553753346-6666
Q ss_pred CCC--C--CCCCCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEEECCEEECCCCEEC
Q ss_conf 874--5--556639889989979808834457754562987887988699893783988998997
Q gi|254780942|r 347 NHL--S--YVGDSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAPITIGQGTYVA 407 (442)
Q Consensus 347 ~~~--~--~igd~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~~gv~ig~~~~i~ 407 (442)
T Consensus 97 ~~~~~~~~~~~~~~Ig~dvwiG~~~~i~~-------gv~IG~gavigagsvVtk--dv~~~~iv~ 152 (204)
T TIGR03308 97 DADFFAWRRAKRVTIGHDVWIGHGAVILP-------GVTIGNGAVIAAGAVVTK--DVAPYTIVA 152 (204)
T ss_pred CHHHHCCCCCCCEEECCCCEECCCCEECC-------CCEECCCCEECCCCEECC--CCCCCEEEE
T ss_conf 12232133478709899768879989919-------979999989977998995--179984998